RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 LDHDQ86WU2 507 aa20.42■□□□□ 0.86
TNFRSF8-202ENST00000413146 EPS8L3Q8TE67 593 aaKnown RBP20.42■□□□□ 0.86
TNFRSF8-202ENST00000413146 CCT6BQ92526 530 aa20.42■□□□□ 0.86
TNFRSF8-202ENST00000413146 HVCN1Q96D96 273 aa20.42■□□□□ 0.86
TNFRSF8-202ENST00000413146 TMEM117Q9H0C3 514 aa20.42■□□□□ 0.86
TNFRSF8-202ENST00000413146 ADAM7Q9H2U9 754 aa20.42■□□□□ 0.86
TNFRSF8-202ENST00000413146 KDM4CQ9H3R0 1056 aa20.42■□□□□ 0.86
TNFRSF8-202ENST00000413146 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.42■□□□□ 0.869e-7■■■■■ 141.2
TNFRSF8-202ENST00000413146 INTS9Q9NV88 658 aaKnown RBP20.42■□□□□ 0.86
TNFRSF8-202ENST00000413146 ZNF219Q9P2Y4 722 aaPredicted RBP20.42■□□□□ 0.86
TNFRSF8-202ENST00000413146 CHUKO15111 745 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 MAPK13O15264 365 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 CYP26A1O43174 497 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 RIPK2O43353 540 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 MMP10P09238 476 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 ITGB5P18084 799 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 CYFIP1Q7L576 1253 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 FAM160B2Q86V87 743 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 PLEKHO2Q8TD55 490 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 ZNF653Q96CK0 615 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 TMEM109Q9BVC6 243 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 ZBTB21Q9ULJ3 1066 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 ZHX2Q9Y6X8 837 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 TCRBV7S2A1N4TA0A589 114 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 TCP10L2B9ZVM9 353 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 GHRP10912 638 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 RARGP13631 454 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 RARRES1P49788 294 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 MFAP3P55082 362 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 SLC47A2Q86VL8 602 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 ZSWIM2Q8NEG5 633 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 ART4Q93070 314 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 BTBD6Q96KE9 485 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 A1CFQ9NQ94 594 aaKnown RBP20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 HAUS2Q9NVX0 235 aa20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 DBR1Q9UK59 544 aaKnown RBP20.41■□□□□ 0.86
TNFRSF8-202ENST00000413146 RASGRF2O14827 1237 aa20.4■□□□□ 0.86
TNFRSF8-202ENST00000413146 RDXP35241 583 aaKnown RBP20.4■□□□□ 0.86
TNFRSF8-202ENST00000413146 SLCO1A2P46721 670 aa20.4■□□□□ 0.86
TNFRSF8-202ENST00000413146 AOC3Q16853 763 aa20.4■□□□□ 0.86
TNFRSF8-202ENST00000413146 GRIPAP1Q4V328 841 aa20.4■□□□□ 0.86
TNFRSF8-202ENST00000413146 UBAP2Q5T6F2 1119 aaKnown RBP20.4■□□□□ 0.86
TNFRSF8-202ENST00000413146 HAUS6Q7Z4H7 955 aa20.4■□□□□ 0.86
TNFRSF8-202ENST00000413146 TAX1BP1Q86VP1 789 aa20.4■□□□□ 0.86
TNFRSF8-202ENST00000413146 FBXO41Q8TF61 875 aa20.4■□□□□ 0.86
TNFRSF8-202ENST00000413146 KCNH7Q9NS40 1196 aa20.4■□□□□ 0.86
TNFRSF8-202ENST00000413146 ASAP2O43150 1006 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 ECEL1O95672 775 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 CYP1A2P05177 515 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 RARAP10276 462 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 RWDD2BP57060 319 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 FMO1Q01740 532 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 MAP2K1Q02750 393 aaPredicted RBP20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 CALCOCO2Q13137 446 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 PPP1R7Q15435 360 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 CYB5D1Q6P9G0 228 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 RNF207Q6ZRF8 634 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 TAOK1Q7L7X3 1001 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 CCDC25Q86WR0 208 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 FUKQ8N0W3 1084 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 KREMEN1Q96MU8 473 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 CD248Q9HCU0 757 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 UVRAGQ9P2Y5 699 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 GTF3C4Q9UKN8 822 aa20.39■□□□□ 0.86
TNFRSF8-202ENST00000413146 ANKRD63C9JTQ0 380 aa20.39■□□□□ 0.85
TNFRSF8-202ENST00000413146 PMM2O15305 246 aa20.39■□□□□ 0.85
TNFRSF8-202ENST00000413146 SNRPFP62306 86 aaKnown RBP20.39■□□□□ 0.85
TNFRSF8-202ENST00000413146 GTF2BQ00403 316 aa20.39■□□□□ 0.85
TNFRSF8-202ENST00000413146 C12orf50Q8NA57 414 aaPredicted RBP20.39■□□□□ 0.85
TNFRSF8-202ENST00000413146 SHC3Q92529 594 aa20.39■□□□□ 0.85
TNFRSF8-202ENST00000413146 JPH2Q9BR39 696 aaPredicted RBP20.39■□□□□ 0.85
TNFRSF8-202ENST00000413146 CCDC113Q9H0I3 377 aa20.39■□□□□ 0.85
TNFRSF8-202ENST00000413146 ACP6Q9NPH0 428 aa20.39■□□□□ 0.85
TNFRSF8-202ENST00000413146 SAMD15Q9P1V8 674 aa20.39■□□□□ 0.85
TNFRSF8-202ENST00000413146 USP20Q9Y2K6 914 aa20.39■□□□□ 0.85
TNFRSF8-202ENST00000413146 GOLGA8IPA6NC78 632 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 CCT8L1PA6NM43 557 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 GOLGA8JA6NMD2 632 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 ADRB2P07550 413 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 KCNJ1P48048 391 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 PDE6CP51160 858 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 SIX1Q15475 284 aaPredicted RBP20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 SNCBQ16143 134 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 CPNE8Q86YQ8 564 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 PARP9Q8IXQ6 854 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 SGSM3Q96HU1 749 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 IWS1Q96ST2 819 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 PRMT1Q99873 361 aaKnown RBP20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 PLVAPQ9BX97 442 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 PLA2G6O60733 806 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 HMGB2P26583 209 aaKnown RBP20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 QARSP47897 775 aaKnown RBP20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 ITIH4Q14624 930 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 CCDC50Q8IVM0 306 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 LRRC34Q8IZ02 419 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 NSRP1Q9H0G5 558 aaKnown RBP20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 FBXO28Q9NVF7 368 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 FEM1BQ9UK73 627 aa20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 ZNFX1Q9P2E3 1918 aaKnown RBP20.38■□□□□ 0.85
TNFRSF8-202ENST00000413146 SLC16A4O15374 487 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms