RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 ZMYM2Q9UBW7 1377 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 RALGAPA2Q2PPJ7 1873 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 TBKBP1A7MCY6 615 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 EIF3DO15371 548 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 CLDN3O15551 220 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 KINO60870 393 aaKnown RBP16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 OFD1O75665 1012 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 ARHGEF15O94989 841 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 RPN1P04843 607 aaKnown RBP16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 MYBP10242 640 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 LIG4P49917 911 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 PSMD2Q13200 908 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 POSTNQ15063 836 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 ZNF568Q3ZCX4 644 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 PPP2R2DQ66LE6 453 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 GLB1LQ6UWU2 654 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 EPM2AIP1Q7L775 607 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 ABI1Q8IZP0 508 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 FIBCD1Q8N539 461 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 HELQQ8TDG4 1101 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 CLP1Q92989 425 aaKnown RBP16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 BICD1Q96G01 975 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 ACCSQ96QU6 501 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 TCHPQ9BT92 498 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 TTYH1Q9H313 450 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 RSAD1Q9HA92 442 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 HOOK1Q9UJC3 728 aaKnown RBP16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 EXOC7Q9UPT5 735 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 STYXL1Q9Y6J8 313 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 CHD7Q9P2D1 2997 aa16.91■□□□□ 0.3
TRAPPC12-203ENST00000411973 TRIP11Q15643 1979 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 RHOBTB3O94955 611 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 LINC00271P0C7V0 271 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 ERVK-21P61565 698 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 MCL1Q07820 350 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 KCNA1Q09470 495 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 KCNB1Q14721 858 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 NOLC1Q14978 699 aaKnown RBP eCLIP16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 KMT5BQ4FZB7 885 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 ZNF697Q5TEC3 545 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 SLC39A4Q6P5W5 647 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 GLIS3Q8NEA6 775 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 ZNF507Q8TCN5 953 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 ZBTB45Q96K62 511 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 MRPL9Q9BYD2 267 aaKnown RBP16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 ZNF576Q9H609 170 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 TMEM206Q9H813 350 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 LMBRD1Q9NUN5 540 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 EXOC1Q9NV70 894 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 CITO14578 2027 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 UBE4BO95155 1302 aa16.9■□□□□ 0.3
TRAPPC12-203ENST00000411973 KIAA1671Q9BY89 1806 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 A0A0B4J269 797 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 AKAP5P24588 427 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 GRM5P41594 1212 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 PNOCQ13519 176 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 BMT2Q1RMZ1 405 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 PAN2Q504Q3 1202 aaKnown RBP16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 NOMO2Q5JPE7 1267 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 LRRC55Q6ZSA7 311 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 LRRC43Q8N309 656 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 SPATA20Q8TB22 786 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 CCDC47Q96A33 483 aaKnown RBP16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 SAMD11Q96NU1 681 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 TGS1Q96RS0 853 aaKnown RBP16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 HAPLN2Q9GZV7 340 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 SEMA6BQ9H3T3 888 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 SNTG2Q9NY99 539 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 KANSL3Q9P2N6 904 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 ANKFY1Q9P2R3 1169 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 RWDD3Q9Y3V2 267 aa16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 MRPL42Q9Y6G3 142 aaKnown RBP16.89■□□□□ 0.29
TRAPPC12-203ENST00000411973 TDRD15B5MCY1 1934 aaKnown RBP16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 ARL5CA6NH57 179 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 ANKRD63C9JTQ0 380 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 GOLGA6L22H0YM25 854 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 PRPF6O94906 941 aaKnown RBP16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 HOXD13P35453 343 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 STK4Q13043 487 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 KYAT1Q16773 422 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 SLFN12LQ6IEE8 588 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 ZBTB33Q86T24 672 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 SCFD1Q8WVM8 642 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 GSDMAQ96QA5 445 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 GAD1Q99259 594 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 APOL6Q9BWW8 343 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 CWH43Q9H720 699 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 SLC39A2Q9NP94 309 aa16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 TYW1Q9NV66 732 aaKnown RBP16.88■□□□□ 0.29
TRAPPC12-203ENST00000411973 TRANK1O15050 2925 aa16.87■□□□□ 0.29
TRAPPC12-203ENST00000411973 FAM189A1O60320 539 aa16.87■□□□□ 0.29
TRAPPC12-203ENST00000411973 RECQL4O94761 1208 aa16.87■□□□□ 0.29
TRAPPC12-203ENST00000411973 SMC2O95347 1197 aa16.87■□□□□ 0.29
TRAPPC12-203ENST00000411973 ADSSP30520 456 aa16.87■□□□□ 0.29
TRAPPC12-203ENST00000411973 MLH1P40692 756 aa16.87■□□□□ 0.29
TRAPPC12-203ENST00000411973 AFF1P51825 1210 aaKnown RBP16.87■□□□□ 0.29
TRAPPC12-203ENST00000411973 SPRED2Q7Z698 418 aa16.87■□□□□ 0.29
TRAPPC12-203ENST00000411973 SYCP3Q8IZU3 236 aa16.87■□□□□ 0.29
TRAPPC12-203ENST00000411973 CEP120Q8N960 986 aa16.87■□□□□ 0.29
TRAPPC12-203ENST00000411973 KIAA0895Q8NCT3 520 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms