RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 FOXD2O60548 495 aaPredicted RBP6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 GAS7O60861 476 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 LRP3O75074 770 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 POMCP01189 267 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 HNRNPA1P09651 372 aaKnown RBP eCLIP6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 OR1G1P47890 313 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 NRLP54845 237 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 IRX6P78412 446 aaPredicted RBP6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 DMWDQ09019 674 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 DRP2Q13474 957 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 PPP2R5DQ14738 602 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 TARBP2Q15633 366 aaKnown RBP6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 RTN1Q16799 776 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 MTERF2Q49AM1 385 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 SLC44A4Q53GD3 710 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 XKR3Q5GH77 459 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 DMRTA1Q5VZB9 504 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 LAIR1Q6GTX8 287 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 APOA5Q6Q788 366 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 ADGRD1Q6QNK2 874 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 PARM1Q6UWI2 310 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 MRPL10Q7Z7H8 261 aaKnown RBP6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 PALB2Q86YC2 1186 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 REXO1Q8N1G1 1221 aaKnown RBP6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 RDM1Q8NG50 284 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 DDX1Q92499 740 aaKnown RBP6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 FGF14Q92915 247 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 CLDN23Q96B33 292 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 NLRP4Q96MN2 994 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 COLEC11Q9BWP8 271 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 C6orf50Q9HD87 102 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 LTB4R2Q9NPC1 389 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 MARCH5Q9NX47 278 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 FNIP2Q9P278 1114 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 SUCLA2Q9P2R7 463 aaPredicted RBP6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 CDH7Q9ULB5 785 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 MRPS17Q9Y2R5 130 aaKnown RBP6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 PRG3Q9Y2Y8 225 aaPredicted RBP6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 BAHCC1Q9P281 2608 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 TRIP11Q15643 1979 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 COL4A2P08572 1712 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 CHD6Q8TD26 2715 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 DMDP11532 3685 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 ZBTB43O43298 467 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 TGM5O43548 720 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 CHMP2AO43633 222 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 MAFO75444 373 aaPredicted RBP6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 ZMYND10O75800 440 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 EFEMP2O95967 443 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 MYBP10242 640 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 ITGA4P13612 1032 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 NCLP19338 710 aaKnown RBP6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 TGM1P22735 817 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 GNA11P29992 359 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 CIITAP33076 1130 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 DSC1Q08554 894 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 SPEM2Q0P670 501 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 FUT2Q10981 343 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 UGCGQ16739 394 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 USP41Q3LFD5 358 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 LIN9Q5TKA1 542 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 LRCH2Q5VUJ6 765 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 LILRA6Q6PI73 481 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 ZNF852Q6ZMS4 543 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 TAS1R1Q7RTX1 841 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 GLYCTKQ8IVS8 523 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 EXOC8Q8IYI6 725 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 COLGALT2Q8IYK4 626 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 HACE1Q8IYU2 909 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 RNF168Q8IYW5 571 aaPredicted RBP6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 BICD2Q8TD16 824 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 PTCD2Q8WV60 388 aaKnown RBP6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 LENG9Q96B70 501 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 IER2Q9BTL4 223 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 RPP25Q9BUL9 199 aaKnown RBP6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 PHF20Q9BVI0 1012 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 TEKT3Q9BXF9 490 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 ZMYND12Q9H0C1 365 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 IFT122Q9HBG6 1241 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 PRMT8Q9NR22 394 aaPredicted RBP6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 CHST7Q9NS84 486 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 ANGPTL2Q9UKU9 493 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 MTF2Q9Y483 593 aaPredicted RBP6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 FAM208BQ5VWN6 2430 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 DNAH14Q0VDD8 3507 aa6.72□□□□□ -1.33
HMGN1P20-201ENST00000411849 KIF26AQ9ULI4 1882 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 CCDC196A0A1B0GTZ2 297 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 ARL5CA6NH57 179 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 MSH4O15457 936 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 XYLBO75191 536 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 ERLIN2O94905 339 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 RETP07949 1114 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 GSPT1P15170 499 aaKnown RBP6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 CD72P21854 359 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 HOXA9P31269 272 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 USP11P51784 963 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 AFF1P51825 1210 aaKnown RBP6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 ADCY1Q08828 1119 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 NCBP1Q09161 790 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms