RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 RNASELQ05823 741 aaKnown RBP13.15□□□□□ -0.3
NEDD1-202ENST00000411739 STRN3Q13033 797 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 HERC4Q5GLZ8 1057 aaPredicted RBP13.15□□□□□ -0.3
NEDD1-202ENST00000411739 LRRC43Q8N309 656 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 FSIP1Q8NA03 581 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 COLGALT1Q8NBJ5 622 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 CCDC51Q96ER9 411 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 BICD1Q96G01 975 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 PRDM6Q9NQX0 595 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 PANK4Q9NVE7 773 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 KBTBD4Q9NVX7 518 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 CACNG4Q9UBN1 327 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 PCDHGC5Q9Y5F6 944 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 NLRC5Q86WI3 1866 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 TISP43B9A030 160 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 KCNA1Q09470 495 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 ZNF568Q3ZCX4 644 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 THNSL1Q8IYQ7 743 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 GLIS3Q8NEA6 775 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 ADPGKQ9BRR6 497 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 HAPLN2Q9GZV7 340 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 CDT1Q9H211 546 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 NRDE2Q9H7Z3 1164 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 MRPL44Q9H9J2 332 aaKnown RBP13.15□□□□□ -0.3
NEDD1-202ENST00000411739 TBX20Q9UMR3 447 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 PLAGL2Q9UPG8 496 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 TNFSF13BQ9Y275 285 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 KIAA1671Q9BY89 1806 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 MATR3P43243 847 aaKnown RBP eCLIP13.14□□□□□ -0.31
NEDD1-202ENST00000411739 CASP5P51878 434 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 ASIC1P78348 528 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 KCNT2Q6UVM3 1135 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 FAM43BQ6ZT52 329 aaPredicted RBP13.14□□□□□ -0.31
NEDD1-202ENST00000411739 TMEM173Q86WV6 379 aaPredicted RBP13.14□□□□□ -0.31
NEDD1-202ENST00000411739 TRIM9Q9C026 710 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 COL4A4P53420 1690 aaPredicted RBP13.14□□□□□ -0.31
NEDD1-202ENST00000411739 RECQL4O94761 1208 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 MYBP10242 640 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 BCAR1P56945 870 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 CUL4BQ13620 913 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 SAMD11Q96NU1 681 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 TNMDQ9H2S6 317 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 PTPRHQ9HD43 1115 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 PCDHB12Q9Y5F1 795 aa13.14□□□□□ -0.31
NEDD1-202ENST00000411739 C5orf67F2Z3F1 127 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 F8W810 466 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 ABLIM1O14639 778 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 ACTN4O43707 911 aaKnown RBP13.13□□□□□ -0.31
NEDD1-202ENST00000411739 GTPBP6O43824 516 aaPredicted RBP13.13□□□□□ -0.31
NEDD1-202ENST00000411739 FGF18O76093 207 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 IRS1P35568 1242 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 CAMK1Q14012 370 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 ZNF720Q7Z2F6 126 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 CNNM3Q8NE01 707 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 GSTCDQ8NEC7 633 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 SPPL3Q8TCT6 385 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 URGCPQ8TCY9 931 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 POF1BQ8WVV4 589 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 C11orf84Q9BUA3 381 aaPredicted RBP13.13□□□□□ -0.31
NEDD1-202ENST00000411739 HPSEQ9Y251 543 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 ANKRD63C9JTQ0 380 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 GCNT3O95395 438 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 SYKP43405 635 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 COASYQ13057 564 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 GLRA4Q5JXX5 417 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 CEP57L1Q8IYX8 460 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 BCL7CQ8WUZ0 217 aaPredicted RBP13.13□□□□□ -0.31
NEDD1-202ENST00000411739 PAGE5Q96GU1 130 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 ZNF558Q96NG5 402 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 RWDD3Q9Y3V2 267 aa13.13□□□□□ -0.31
NEDD1-202ENST00000411739 TULP1O00294 542 aaPredicted RBP13.12□□□□□ -0.31
NEDD1-202ENST00000411739 HNRNPDLO14979 420 aaKnown RBP13.12□□□□□ -0.31
NEDD1-202ENST00000411739 PRPF6O94906 941 aaKnown RBP13.12□□□□□ -0.31
NEDD1-202ENST00000411739 RB1P06400 928 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 LAG3P18627 525 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 SLC11A1P49279 550 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 LIG4P49917 911 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 SKIV2LQ15477 1246 aaKnown RBP13.12□□□□□ -0.31
NEDD1-202ENST00000411739 ZBTB41Q5SVQ8 909 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 SLC39A4Q6P5W5 647 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 MPZL3Q6UWV2 235 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 TMEM130Q8N3G9 435 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 MRPS27Q92552 414 aaKnown RBP13.12□□□□□ -0.31
NEDD1-202ENST00000411739 MRPL9Q9BYD2 267 aaKnown RBP13.12□□□□□ -0.31
NEDD1-202ENST00000411739 CUEDC2Q9H467 287 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 AAASQ9NRG9 546 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 CHMP5Q9NZZ3 219 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 GIT1Q9Y2X7 761 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 PRG3Q9Y2Y8 225 aaPredicted RBP13.12□□□□□ -0.31
NEDD1-202ENST00000411739 SPTBN5Q9NRC6 3674 aaKnown RBP13.12□□□□□ -0.31
NEDD1-202ENST00000411739 GALTP07902 379 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 SLFN14P0C7P3 912 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 PROZP22891 400 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 ALDH7A1P49419 539 aaKnown RBP13.12□□□□□ -0.31
NEDD1-202ENST00000411739 GTF2BQ00403 316 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 AMPD3Q01432 767 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 DCAF4L1Q3SXM0 396 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 CCDC65Q8IXS2 484 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 HACE1Q8IYU2 909 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms