RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 GIT1Q9Y2X7 761 aa17.94■□□□□ 0.46
NOD1-202ENST00000411552 TDRD15B5MCY1 1934 aaKnown RBP17.94■□□□□ 0.46
NOD1-202ENST00000411552 XIRP2A4UGR9 3374 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 H0YCG3 227 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 TRAK2O60296 914 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 CSPG5O95196 566 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 ALDH7A1P49419 539 aaKnown RBP17.93■□□□□ 0.46
NOD1-202ENST00000411552 DCAF4L1Q3SXM0 396 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 DHX58Q96C10 678 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 DNAJC19Q96DA6 116 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 FIZ1Q96SL8 496 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 PTPRHQ9HD43 1115 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 PRDM6Q9NQX0 595 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 SPG21Q9NZD8 308 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 KLK14Q9P0G3 267 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 DNAJB4Q9UDY4 337 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 PARP2Q9UGN5 583 aa17.93■□□□□ 0.46
NOD1-202ENST00000411552 K7ENM7 598 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 DDHD2O94830 711 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 PPM1AP35813 382 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 SCNN1GP51170 649 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 TIGD5Q53EQ6 642 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 SFR1Q86XK3 245 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 FAM178BQ8IXR5 827 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 SLC39A11Q8N1S5 342 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 IQUBQ8NA54 791 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 POF1BQ8WVV4 589 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 STAMQ92783 540 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 KCNN1Q92952 543 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 CDT1Q9H211 546 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 CUEDC2Q9H467 287 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 MIOSQ9NXC5 875 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 SNTG2Q9NY99 539 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 FAM13BQ9NYF5 915 aa17.92■□□□□ 0.46
NOD1-202ENST00000411552 ZMYM2Q9UBW7 1377 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 NT5C1B-RDH14C9J2C7 533 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 ABLIM1O14639 778 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 POLR2DO15514 142 aaKnown RBP17.91■□□□□ 0.46
NOD1-202ENST00000411552 RECQL4O94761 1208 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 GALTP07902 379 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 SCP2P22307 547 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 PROZP22891 400 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 NMT1P30419 496 aaKnown RBP17.91■□□□□ 0.46
NOD1-202ENST00000411552 NUCB2P80303 420 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 PLCB3Q01970 1234 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 UBE3AQ05086 875 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 SKIV2LQ15477 1246 aaKnown RBP17.91■□□□□ 0.46
NOD1-202ENST00000411552 ZNF568Q3ZCX4 644 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 APBB1IPQ7Z5R6 666 aaPredicted RBP17.91■□□□□ 0.46
NOD1-202ENST00000411552 ZBTB33Q86T24 672 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 TMEM173Q86WV6 379 aaPredicted RBP17.91■□□□□ 0.46
NOD1-202ENST00000411552 GSTCDQ8NEC7 633 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 FAM193BQ96PV7 902 aaPredicted RBP17.91■□□□□ 0.46
NOD1-202ENST00000411552 SCAND2PQ9GZW5 306 aaPredicted RBP17.91■□□□□ 0.46
NOD1-202ENST00000411552 NSUN3Q9H649 340 aaKnown RBP17.91■□□□□ 0.46
NOD1-202ENST00000411552 KBTBD4Q9NVX7 518 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 TBX20Q9UMR3 447 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 GDAQ9Y2T3 454 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 TRIP11Q15643 1979 aa17.91■□□□□ 0.46
NOD1-202ENST00000411552 GAP43P17677 238 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 IRS1P35568 1242 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 SLC11A1P49279 550 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 TCEAL5Q5H9L2 206 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 ADALQ6DHV7 355 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 MPZL3Q6UWV2 235 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 MRPS27Q92552 414 aaKnown RBP17.9■□□□□ 0.46
NOD1-202ENST00000411552 ZBTB45Q96K62 511 aaPredicted RBP17.9■□□□□ 0.46
NOD1-202ENST00000411552 TCHPQ9BT92 498 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 CXCL16Q9H2A7 254 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 TNMDQ9H2S6 317 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 TLR9Q9NR96 1032 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 ANKFY1Q9P2R3 1169 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 KCNH3Q9ULD8 1083 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 LZTS1Q9Y250 596 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 PCDHGC5Q9Y5F6 944 aa17.9■□□□□ 0.46
NOD1-202ENST00000411552 SPTBN5Q9NRC6 3674 aaKnown RBP17.9■□□□□ 0.46
NOD1-202ENST00000411552 FRMD3A2A2Y4 597 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 TOM1L1O75674 476 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 MCF2P10911 925 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 IDEP14735 1019 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 CMA1P23946 247 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 ERVFC1P60507 584 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 GTF2BQ00403 316 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 KRT17Q04695 432 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 DSC1Q08554 894 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 ZC2HC1CQ53FD0 456 aaPredicted RBP17.89■□□□□ 0.45
NOD1-202ENST00000411552 ZPBP2Q6X784 338 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.89■□□□□ 0.45
NOD1-202ENST00000411552 COLGALT2Q8IYK4 626 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 CEP120Q8N960 986 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 BCL7CQ8WUZ0 217 aaPredicted RBP17.89■□□□□ 0.45
NOD1-202ENST00000411552 BICD1Q96G01 975 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 IGSF21Q96ID5 467 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 RPS6KC1Q96S38 1066 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 TMEM175Q9BSA9 504 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 ST6GALNAC4Q9H4F1 302 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 GDPD2Q9HCC8 539 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 SEL1LQ9UBV2 794 aa17.89■□□□□ 0.45
NOD1-202ENST00000411552 CITO14578 2027 aa17.88■□□□□ 0.45
NOD1-202ENST00000411552 CARNS1A5YM72 827 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms