RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 F8W810 466 aa19.52■□□□□ 0.72
LSM5-204ENST00000409909 SF3A1Q15459 793 aaKnown RBP19.52■□□□□ 0.72
LSM5-204ENST00000409909 TMEM119Q4V9L6 283 aa19.52■□□□□ 0.72
LSM5-204ENST00000409909 SYCE2Q6PIF2 218 aa19.52■□□□□ 0.72
LSM5-204ENST00000409909 CABP7Q86V35 215 aa19.52■□□□□ 0.72
LSM5-204ENST00000409909 SYT2Q8N9I0 419 aaPredicted RBP19.52■□□□□ 0.72
LSM5-204ENST00000409909 INTS4Q96HW7 963 aaKnown RBP19.52■□□□□ 0.72
LSM5-204ENST00000409909 NT5C3AQ9H0P0 336 aa19.52■□□□□ 0.72
LSM5-204ENST00000409909 CXCL16Q9H2A7 254 aa19.52■□□□□ 0.72
LSM5-204ENST00000409909 FOXD4L1Q9NU39 408 aa19.52■□□□□ 0.72
LSM5-204ENST00000409909 PRG3Q9Y2Y8 225 aaPredicted RBP19.52■□□□□ 0.72
LSM5-204ENST00000409909 USP15Q9Y4E8 981 aaPredicted RBP19.52■□□□□ 0.72
LSM5-204ENST00000409909 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.51■□□□□ 0.71
LSM5-204ENST00000409909 CCDC169A6NNP5 214 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 K7ERI5 159 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 EFEMP2O95967 443 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 GUCY2CP25092 1073 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 CA8P35219 290 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 OR1G1P47890 313 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 SLC12A3P55017 1021 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 RAD51AP2Q09MP3 1159 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 TMEM132AQ24JP5 1023 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 ANKRD54Q6NXT1 300 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 TAS1R3Q7RTX0 852 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 TAS1R1Q7RTX1 841 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 KCTD17Q8N5Z5 321 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 LRRC15Q8TF66 581 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 AK8Q96MA6 479 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 DRC1Q96MC2 740 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 S1PR5Q9H228 398 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 SNTG2Q9NY99 539 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 GTF3C3Q9Y5Q9 886 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 HCFC2Q9Y5Z7 792 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 CLIC4Q9Y696 253 aa19.51■□□□□ 0.71
LSM5-204ENST00000409909 ZMYM2Q9UBW7 1377 aa19.5■□□□□ 0.71
LSM5-204ENST00000409909 K7ELQ4 463 aaPredicted RBP19.5■□□□□ 0.71
LSM5-204ENST00000409909 LILRB3O75022 631 aa19.5■□□□□ 0.71
LSM5-204ENST00000409909 BMP15O95972 392 aa19.5■□□□□ 0.71
LSM5-204ENST00000409909 SSBP05455 408 aaKnown RBP eCLIP19.5■□□□□ 0.71
LSM5-204ENST00000409909 PLA2G4BP0C869 781 aa19.5■□□□□ 0.71
LSM5-204ENST00000409909 RESTQ13127 1097 aa19.5■□□□□ 0.71
LSM5-204ENST00000409909 BMS1Q14692 1282 aaKnown RBP19.5■□□□□ 0.71
LSM5-204ENST00000409909 PTPN14Q15678 1187 aa19.5■□□□□ 0.71
LSM5-204ENST00000409909 ARSHQ5FYA8 562 aa19.5■□□□□ 0.71
LSM5-204ENST00000409909 FAM173BQ6P4H8 233 aa19.5■□□□□ 0.71
LSM5-204ENST00000409909 SUSD6Q92537 303 aa19.5■□□□□ 0.71
LSM5-204ENST00000409909 CDK5RAP3Q96JB5 506 aa19.5■□□□□ 0.71
LSM5-204ENST00000409909 APOL5Q9BWW9 433 aa19.5■□□□□ 0.71
LSM5-204ENST00000409909 ARHGAP28Q9P2N2 729 aa19.5■□□□□ 0.71
LSM5-204ENST00000409909 NPHP3-ACAD11A0A0J9YXS1 232 aa19.49■□□□□ 0.71
LSM5-204ENST00000409909 PI4K2BG5E9Z4 385 aa19.49■□□□□ 0.71
LSM5-204ENST00000409909 PTGESO14684 152 aa19.49■□□□□ 0.71
LSM5-204ENST00000409909 SRGAP2BP0DMP2 458 aa19.49■□□□□ 0.71
LSM5-204ENST00000409909 DMP1Q13316 513 aaPredicted RBP19.49■□□□□ 0.71
LSM5-204ENST00000409909 PTPAQ15257 358 aa19.49■□□□□ 0.71
LSM5-204ENST00000409909 ATF7IP2Q5U623 682 aa19.49■□□□□ 0.71
LSM5-204ENST00000409909 RNF168Q8IYW5 571 aaPredicted RBP19.49■□□□□ 0.71
LSM5-204ENST00000409909 SLC22A17Q8WUG5 538 aa19.49■□□□□ 0.71
LSM5-204ENST00000409909 RABGGTAQ92696 567 aa19.49■□□□□ 0.71
LSM5-204ENST00000409909 NTPCRQ9BSD7 190 aaKnown RBP19.49■□□□□ 0.71
LSM5-204ENST00000409909 TIPINQ9BVW5 301 aa19.49■□□□□ 0.71
LSM5-204ENST00000409909 TMEM134Q9H6X4 195 aa19.49■□□□□ 0.71
LSM5-204ENST00000409909 KMT5AQ9NQR1 393 aa19.49■□□□□ 0.71
LSM5-204ENST00000409909 CACNG4Q9UBN1 327 aa19.49■□□□□ 0.71
LSM5-204ENST00000409909 SLC16A4O15374 487 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 SLC26A4O43511 780 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 RECQL4O94761 1208 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 LONP1P36776 959 aaKnown RBP19.48■□□□□ 0.71
LSM5-204ENST00000409909 UBA7P41226 1012 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 GRIK3Q13003 919 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 GIT2Q14161 759 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 CASP10Q92851 521 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 ACO2Q99798 780 aaKnown RBP19.48■□□□□ 0.71
LSM5-204ENST00000409909 ADPGKQ9BRR6 497 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 C17orf75Q9HAS0 396 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 PTPRHQ9HD43 1115 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 BLOC1S4Q9NUP1 217 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 STK39Q9UEW8 545 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 MTMR6Q9Y217 621 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 TNFSF13BQ9Y275 285 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 PHLPP2Q6ZVD8 1323 aa19.48■□□□□ 0.71
LSM5-204ENST00000409909 SOD2P04179 222 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 CNPP09543 421 aaKnown RBP19.47■□□□□ 0.71
LSM5-204ENST00000409909 EPCAMP16422 314 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 HOXB8P17481 243 aaPredicted RBP19.47■□□□□ 0.71
LSM5-204ENST00000409909 CACNB1Q02641 598 aaPredicted RBP19.47■□□□□ 0.71
LSM5-204ENST00000409909 KARSQ15046 597 aaKnown RBP19.47■□□□□ 0.71
LSM5-204ENST00000409909 NAB2Q15742 525 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 DCAF4L1Q3SXM0 396 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 SNX21Q969T3 373 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 CALML4Q96GE6 196 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 KLHL5Q96PQ7 755 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 RPS6KC1Q96S38 1066 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 PAAF1Q9BRP4 392 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 HERC2P3Q9BVR0 1158 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 COLEC11Q9BWP8 271 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 KCND2Q9NZV8 630 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 CDH22Q9UJ99 828 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 GDAQ9Y2T3 454 aa19.47■□□□□ 0.71
LSM5-204ENST00000409909 RBM19Q9Y4C8 960 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms