RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 HS2ST1Q7LGA3 356 aa18.08■□□□□ 0.49
TSPAN4-208ENST00000409531 FUCA2Q9BTY2 467 aa18.08■□□□□ 0.49
TSPAN4-208ENST00000409531 TYW1Q9NV66 732 aaKnown RBP18.08■□□□□ 0.49
TSPAN4-208ENST00000409531 PDXKO00764 312 aa18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 UPP2O95045 317 aa18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 CD44P16070 742 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 CCNE1P24864 410 aa18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 ERCC5P28715 1186 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 ZNF445P59923 1031 aa18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 HTRA4P83105 476 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 KCNA1Q09470 495 aa18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 PAK1Q13153 545 aa18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 AMHR2Q16671 573 aa18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 SLFN12LQ6IEE8 588 aa18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 CENPPQ6IPU0 288 aa18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 KLHL10Q6JEL2 608 aa18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 APBB1IPQ7Z5R6 666 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 FAM228AQ86W67 206 aa18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 TSG101Q99816 390 aa18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 TSPYL2Q9H2G4 693 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 TMX1Q9H3N1 280 aa18.07■□□□□ 0.48
TSPAN4-208ENST00000409531 MYO9BQ13459 2157 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 CALUO43852 315 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 TSPAN1O60635 241 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 HOXD13P35453 343 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 TAP1Q03518 808 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 LRRC63Q05C16 580 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 ATF7IP2Q5U623 682 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 NOTUMQ6P988 496 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 FOXR2Q6PJQ5 311 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 NELFBQ8WX92 580 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 P2RX5Q93086 422 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 ACO2Q99798 780 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 ADPGKQ9BRR6 497 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 TARS2Q9BW92 718 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 KCTD10Q9H3F6 313 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 CHST12Q9NRB3 414 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 AGPAT5Q9NUQ2 364 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 RWDD2AQ9UIY3 292 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 CTNND2Q9UQB3 1225 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 TRAF3IP3Q9Y228 551 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 TNFSF13BQ9Y275 285 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 MICAL3Q7RTP6 2002 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 ZMYM2Q9UBW7 1377 aa18.06■□□□□ 0.48
TSPAN4-208ENST00000409531 LCHNA4D1U4 455 aa18.05■□□□□ 0.48
TSPAN4-208ENST00000409531 N4BP3O15049 544 aa18.05■□□□□ 0.48
TSPAN4-208ENST00000409531 TOM1L1O75674 476 aa18.05■□□□□ 0.48
TSPAN4-208ENST00000409531 ARF4P18085 180 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-208ENST00000409531 FGFR4P22455 802 aa18.05■□□□□ 0.48
TSPAN4-208ENST00000409531 HSP90AA2PQ14568 343 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-208ENST00000409531 ANO6Q4KMQ2 910 aa18.05■□□□□ 0.48
TSPAN4-208ENST00000409531 LINC01599Q8WXQ3 324 aa18.05■□□□□ 0.48
TSPAN4-208ENST00000409531 CCDC51Q96ER9 411 aa18.05■□□□□ 0.48
TSPAN4-208ENST00000409531 YME1L1Q96TA2 773 aa18.05■□□□□ 0.48
TSPAN4-208ENST00000409531 DNAJC25Q9H1X3 360 aa18.05■□□□□ 0.48
TSPAN4-208ENST00000409531 TSPY26PQ9H489 355 aa18.05■□□□□ 0.48
TSPAN4-208ENST00000409531 PIN4Q9Y237 131 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-208ENST00000409531 A0A1B0GUA9 196 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 KIAA0391O15091 583 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 CLDN3O15551 220 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 B4GALT5O43286 388 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 ZSCAN20P17040 1043 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 GARTP22102 1010 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 MATR3P43243 847 aaKnown RBP eCLIP18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 NFIL3Q16649 462 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 EDRF1Q3B7T1 1238 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 ARMCX5Q6P1M9 558 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 CRIPAKQ8N1N5 446 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 MYLIPQ8WY64 445 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 ADAM2Q99965 735 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 TCHPQ9BT92 498 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 PRDM12Q9H4Q4 367 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 RGS18Q9NS28 235 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 STYXL1Q9Y6J8 313 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 GBF1Q92538 1859 aa18.04■□□□□ 0.48
TSPAN4-208ENST00000409531 TGFB1I1O43294 461 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 MGEA5O60502 916 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 ARHGEF15O94989 841 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 EDN1P05305 212 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 STAG3L1P0CL83 205 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 RPL13P26373 211 aaKnown RBP18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 MYBPC2Q14324 1141 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 SLC27A1Q6PCB7 646 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 MPZL3Q6UWV2 235 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 C11orf57Q6ZUT1 292 aaPredicted RBP18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 SLC24A5Q71RS6 500 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 C12orf56Q8IXR9 622 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 SP7Q8TDD2 431 aaPredicted RBP18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 POMGNT1Q8WZA1 660 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 CPB2Q96IY4 423 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 BPIFA3Q9BQP9 254 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 AGPAT3Q9NRZ7 376 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 C1orf112Q9NSG2 853 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 RNF216Q9NWF9 866 aaPredicted RBP18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 ANKFY1Q9P2R3 1169 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 TTC3P53804 2025 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 PTPRSQ13332 1948 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 CHD9Q3L8U1 2897 aa18.03■□□□□ 0.48
TSPAN4-208ENST00000409531 LINC01553A4QN01 128 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 TTLL13PA6NNM8 815 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms