RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 SEZ6LQ9BYH1 1024 aa18.36■□□□□ 0.53
SSB-202ENST00000409333 PDZD7Q9H5P4 517 aa18.36■□□□□ 0.53
SSB-202ENST00000409333 TNFSF13BQ9Y275 285 aa18.36■□□□□ 0.53
SSB-202ENST00000409333 PES1O00541 588 aaKnown RBP18.35■□□□□ 0.53
SSB-202ENST00000409333 ACOT2P49753 483 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 MCL1Q07820 350 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 NOLC1Q14978 699 aaKnown RBP eCLIP18.35■□□□□ 0.531e-7■■■■■ 40.2
SSB-202ENST00000409333 FILIP1LQ4L180 1135 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 SEZ6Q53EL9 994 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 ZNF618Q5T7W0 954 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 SLC39A5Q6ZMH5 540 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 FAM228AQ86W67 206 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 FAM213AQ9BRX8 229 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 OSBPL7Q9BZF2 842 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 METTL14Q9HCE5 456 aaKnown RBP18.35■□□□□ 0.53
SSB-202ENST00000409333 NOC2LQ9Y3T9 749 aaKnown RBP18.35■□□□□ 0.53
SSB-202ENST00000409333 A0A1B0GUA9 196 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 EXTL3O43909 919 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 FAM189A1O60320 539 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 CD4P01730 458 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 HOXA11P31270 313 aaPredicted RBP18.35■□□□□ 0.53
SSB-202ENST00000409333 VWA3BQ502W6 1294 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 DCAF17Q5H9S7 520 aaPredicted RBP18.35■□□□□ 0.53
SSB-202ENST00000409333 CRELD2Q6UXH1 353 aaPredicted RBP18.35■□□□□ 0.53
SSB-202ENST00000409333 ANKLE1Q8NAG6 615 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 PDLIM2Q96JY6 352 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 CDT1Q9H211 546 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.35■□□□□ 0.53
SSB-202ENST00000409333 ALPK3Q96L96 1907 aa18.35■□□□□ 0.53
SSB-202ENST00000409333 LGALS16A8MUM7 142 aa18.34■□□□□ 0.53
SSB-202ENST00000409333 KIAA0391O15091 583 aaKnown RBP18.34■□□□□ 0.53
SSB-202ENST00000409333 MAPK13O15264 365 aa18.34■□□□□ 0.53
SSB-202ENST00000409333 PQBP1O60828 265 aaKnown RBP18.34■□□□□ 0.53
SSB-202ENST00000409333 TPM2P07951 284 aa18.34■□□□□ 0.53
SSB-202ENST00000409333 CKBP12277 381 aa18.34■□□□□ 0.53
SSB-202ENST00000409333 BFSP1Q12934 665 aa18.34■□□□□ 0.53
SSB-202ENST00000409333 PCBP1Q15365 356 aaKnown RBP eCLIP18.34■□□□□ 0.53
SSB-202ENST00000409333 TCERG1LQ5VWI1 586 aa18.34■□□□□ 0.53
SSB-202ENST00000409333 SLC35C1Q96A29 364 aa18.34■□□□□ 0.53
SSB-202ENST00000409333 TMEM106CQ9BVX2 250 aa18.34■□□□□ 0.53
SSB-202ENST00000409333 NDST4Q9H3R1 872 aa18.34■□□□□ 0.53
SSB-202ENST00000409333 AGPAT5Q9NUQ2 364 aa18.34■□□□□ 0.53
SSB-202ENST00000409333 TPM3P06753 285 aa18.33■□□□□ 0.53
SSB-202ENST00000409333 TNFSF9P41273 254 aa18.33■□□□□ 0.53
SSB-202ENST00000409333 DLG4P78352 724 aa18.33■□□□□ 0.53
SSB-202ENST00000409333 FAM26DQ5JW98 314 aa18.33■□□□□ 0.53
SSB-202ENST00000409333 INTS8Q75QN2 995 aaKnown RBP18.33■□□□□ 0.53
SSB-202ENST00000409333 CEP120Q8N960 986 aa18.33■□□□□ 0.53
SSB-202ENST00000409333 PLEKHO2Q8TD55 490 aa18.33■□□□□ 0.53
SSB-202ENST00000409333 PAWRQ96IZ0 340 aaKnown RBP18.33■□□□□ 0.53
SSB-202ENST00000409333 PIN4Q9Y237 131 aaKnown RBP18.33■□□□□ 0.53
SSB-202ENST00000409333 MROH7Q68CQ1 1323 aa18.33■□□□□ 0.52
SSB-202ENST00000409333 TET1Q8NFU7 2136 aa18.33■□□□□ 0.52
SSB-202ENST00000409333 OGTO15294 1046 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 CAND2O75155 1236 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 RPS6KA5O75582 802 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 LDHAP00338 332 aaKnown RBP18.32■□□□□ 0.52
SSB-202ENST00000409333 TRIM49P0CI25 452 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 TRIM49CP0CI26 452 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 CDC25BP30305 580 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 DEKP35659 375 aaKnown RBP18.32■□□□□ 0.52
SSB-202ENST00000409333 UBXN1Q04323 297 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 CYP24A1Q07973 514 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 FBXO47Q5MNV8 452 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 TRAF7Q6Q0C0 670 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 CCDC155Q8N6L0 562 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 MFSD14AQ96MC6 490 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 ZNF233A6NK53 670 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 GHRP10912 638 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 KRT13P13646 458 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 PBX1P40424 430 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 OSTNP61366 133 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 CCDC173Q0VFZ6 552 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 KCNH2Q12809 1159 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 TRIM60Q495X7 471 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 NOTUMQ6P988 496 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 ANKRD33Q7Z3H0 272 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.32■□□□□ 0.52
SSB-202ENST00000409333 VSTM4Q8IW00 320 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 THNSL1Q8IYQ7 743 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 SPC24Q8NBT2 197 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 AGO3Q9H9G7 860 aaKnown RBP18.32■□□□□ 0.52
SSB-202ENST00000409333 KIAA1586Q9HCI6 787 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 ST3GAL5Q9UNP4 418 aa18.32■□□□□ 0.52
SSB-202ENST00000409333 TULP1O00294 542 aaPredicted RBP18.31■□□□□ 0.52
SSB-202ENST00000409333 MCF2P10911 925 aa18.31■□□□□ 0.52
SSB-202ENST00000409333 AXLP30530 894 aa18.31■□□□□ 0.52
SSB-202ENST00000409333 VAMP7P51809 220 aa18.31■□□□□ 0.52
SSB-202ENST00000409333 WNT7BP56706 349 aa18.31■□□□□ 0.52
SSB-202ENST00000409333 NCBP1Q09161 790 aaKnown RBP18.31■□□□□ 0.52
SSB-202ENST00000409333 LPIN1Q14693 890 aa18.31■□□□□ 0.52
SSB-202ENST00000409333 C1orf220Q5T0J3 134 aa18.31■□□□□ 0.52
SSB-202ENST00000409333 DRC7Q8IY82 874 aa18.31■□□□□ 0.52
SSB-202ENST00000409333 CAGE1Q8TC20 777 aa18.31■□□□□ 0.52
SSB-202ENST00000409333 CCDC127Q96BQ5 260 aa18.31■□□□□ 0.52
SSB-202ENST00000409333 C11orf49Q9H6J7 331 aa18.31■□□□□ 0.52
SSB-202ENST00000409333 NPTXRO95502 500 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 AFPP02771 609 aaKnown RBP18.3■□□□□ 0.52
SSB-202ENST00000409333 RBL2Q08999 1139 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 NFX1Q12986 1120 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms