RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 PRKCBP05771 671 aa21.3■■□□□ 1
SMARCB1-204ENST00000407422 PRPF4BQ13523 1007 aaKnown RBP21.3■■□□□ 1
SMARCB1-204ENST00000407422 GIT2Q14161 759 aa21.3■■□□□ 1
SMARCB1-204ENST00000407422 MAPK6Q16659 721 aa21.3■■□□□ 1
SMARCB1-204ENST00000407422 KRT79Q5XKE5 535 aa21.3■■□□□ 1
SMARCB1-204ENST00000407422 KANK3Q6NY19 840 aa21.3■■□□□ 1
SMARCB1-204ENST00000407422 TAS1R1Q7RTX1 841 aa21.3■■□□□ 1
SMARCB1-204ENST00000407422 C12orf76Q8N812 135 aaPredicted RBP21.3■■□□□ 1
SMARCB1-204ENST00000407422 ATP2C1P98194 919 aaPredicted RBP21.29■■□□□ 1
SMARCB1-204ENST00000407422 HERC4Q5GLZ8 1057 aaPredicted RBP21.29■■□□□ 1
SMARCB1-204ENST00000407422 KCNK18Q7Z418 384 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 SLC22A17Q8WUG5 538 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 DNM3Q9UQ16 869 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 STK24Q9Y6E0 443 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 TECTAO75443 2155 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 ACKR2O00590 384 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 C2CD2LO14523 706 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 LILRB3O75022 631 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 PPP2R5AQ15172 486 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 TMEM132AQ24JP5 1023 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 TPRNQ4KMQ1 711 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 EEF1DP3Q658K8 133 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 FEZF2Q8TBJ5 459 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 RABGGTAQ92696 567 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 KIFAP3Q92845 792 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 IFT74Q96LB3 600 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 CXCL16Q9H2A7 254 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 ADAM7Q9H2U9 754 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 CACNG4Q9UBN1 327 aa21.29■■□□□ 1
SMARCB1-204ENST00000407422 TRIP11Q15643 1979 aa21.28■■□□□ 1
SMARCB1-204ENST00000407422 PRR33A8MZF0 331 aa21.28■■□□□ 1
SMARCB1-204ENST00000407422 N4BP3O15049 544 aa21.28■■□□□ 1
SMARCB1-204ENST00000407422 EFEMP2O95967 443 aa21.28■■□□□ 1
SMARCB1-204ENST00000407422 SOD2P04179 222 aa21.28■■□□□ 1
SMARCB1-204ENST00000407422 CNPP09543 421 aaKnown RBP21.28■■□□□ 1
SMARCB1-204ENST00000407422 WEE2P0C1S8 567 aa21.28■■□□□ 1
SMARCB1-204ENST00000407422 SP100P23497 879 aaPredicted RBP21.28■■□□□ 1
SMARCB1-204ENST00000407422 ZRSR1Q15695 479 aaKnown RBP21.28■■□□□ 1
SMARCB1-204ENST00000407422 DAW1Q8N136 415 aa21.28■■□□□ 1
SMARCB1-204ENST00000407422 KLHL5Q96PQ7 755 aa21.28■■□□□ 1
SMARCB1-204ENST00000407422 RUSC1Q9BVN2 902 aa21.28■■□□□ 1
SMARCB1-204ENST00000407422 SNTG2Q9NY99 539 aa21.28■■□□□ 1
SMARCB1-204ENST00000407422 STK39Q9UEW8 545 aa21.28■■□□□ 1
SMARCB1-204ENST00000407422 RARS2Q5T160 578 aaKnown RBP21.27■■□□□ 1
SMARCB1-204ENST00000407422 LARP1BQ659C4 914 aaKnown RBP21.27■■□□□ 1
SMARCB1-204ENST00000407422 RNF168Q8IYW5 571 aaPredicted RBP21.27■■□□□ 1
SMARCB1-204ENST00000407422 MRPL17Q9NRX2 175 aaKnown RBP21.27■■□□□ 1
SMARCB1-204ENST00000407422 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.27■■□□□ 1
SMARCB1-204ENST00000407422 MYO10Q9HD67 2058 aa21.27■■□□□ 1
SMARCB1-204ENST00000407422 PLXNA3P51805 1871 aa21.27■■□□□ 1
SMARCB1-204ENST00000407422 MYH11P35749 1972 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 VWA3AA6NCI4 1184 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 HIP1RO75146 1068 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 KLRC2P26717 231 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 ITIH3Q06033 890 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 GRIK3Q13003 919 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 NT5DC1Q5TFE4 455 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 CES5AQ6NT32 575 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 RINT1Q6NUQ1 792 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 RPS6KC1Q96S38 1066 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 PAAF1Q9BRP4 392 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 HERC2P3Q9BVR0 1158 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 EMILIN2Q9BXX0 1053 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 POMKQ9H5K3 350 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 NR1I2O75469 434 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 URODP06132 367 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 CLCN4P51793 760 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 EFNA5P52803 228 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 PEX3P56589 373 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 C1orf186Q6ZWK4 172 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 B3GALT6Q96L58 329 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 PNMA5Q96PV4 448 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 PLIN2Q99541 437 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 COLEC11Q9BWP8 271 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 DZANK1Q9NVP4 752 aa21.26■□□□□ 0.99
SMARCB1-204ENST00000407422 ZMYM2Q9UBW7 1377 aa21.25■□□□□ 0.99
SMARCB1-204ENST00000407422 CCDC169A6NNP5 214 aa21.25■□□□□ 0.99
SMARCB1-204ENST00000407422 PTGESO14684 152 aa21.25■□□□□ 0.99
SMARCB1-204ENST00000407422 RECQL4O94761 1208 aa21.25■□□□□ 0.99
SMARCB1-204ENST00000407422 NPTX2P47972 431 aa21.25■□□□□ 0.99
SMARCB1-204ENST00000407422 MAPK7Q13164 816 aa21.25■□□□□ 0.99
SMARCB1-204ENST00000407422 KIAA0319Q5VV43 1072 aa21.25■□□□□ 0.99
SMARCB1-204ENST00000407422 CABP7Q86V35 215 aa21.25■□□□□ 0.99
SMARCB1-204ENST00000407422 PPFIBP1Q86W92 1011 aa21.25■□□□□ 0.99
SMARCB1-204ENST00000407422 ADPGKQ9BRR6 497 aa21.25■□□□□ 0.99
SMARCB1-204ENST00000407422 GPR62Q9BZJ7 368 aa21.25■□□□□ 0.99
SMARCB1-204ENST00000407422 C2orf16Q68DN1 1984 aa21.24■□□□□ 0.99
SMARCB1-204ENST00000407422 K7ERI5 159 aa21.24■□□□□ 0.99
SMARCB1-204ENST00000407422 HYIQ5T013 277 aa21.24■□□□□ 0.99
SMARCB1-204ENST00000407422 ATF7IP2Q5U623 682 aa21.24■□□□□ 0.99
SMARCB1-204ENST00000407422 TMC5Q6UXY8 1006 aa21.24■□□□□ 0.99
SMARCB1-204ENST00000407422 EDAQ92838 391 aa21.24■□□□□ 0.99
SMARCB1-204ENST00000407422 FBXL18Q96ME1 805 aa21.24■□□□□ 0.99
SMARCB1-204ENST00000407422 TSHZ2Q9NRE2 1034 aa21.24■□□□□ 0.99
SMARCB1-204ENST00000407422 GDAQ9Y2T3 454 aa21.24■□□□□ 0.99
SMARCB1-204ENST00000407422 SFI1A8K8P3 1242 aa21.23■□□□□ 0.99
SMARCB1-204ENST00000407422 TEX28O15482 410 aa21.23■□□□□ 0.99
SMARCB1-204ENST00000407422 GLUD2P49448 558 aa21.23■□□□□ 0.99
SMARCB1-204ENST00000407422 RAD51AP2Q09MP3 1159 aa21.23■□□□□ 0.99
SMARCB1-204ENST00000407422 FUT10Q6P4F1 479 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms