RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 CYBBP04839 570 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 PODNQ7Z5L7 613 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 CDKL3Q8IVW4 592 aaPredicted RBP12.74□□□□□ -0.37
SMCR8-201ENST00000406438 KIF12Q96FN5 646 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 OSBPL9Q96SU4 736 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 GIMAP4Q9NUV9 329 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 SPDYE5A6NIY4 337 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 SUPT3HO75486 399 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 PLEKHA8P1O95397 391 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 CPB1P15086 417 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 STAT3P40763 770 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 ARL4DP49703 201 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 LAMB3Q13751 1172 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 SPDYE7PQ495Y7 208 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 OSBP2Q969R2 916 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 SIK2Q9H0K1 926 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 ABCB6Q9NP58 842 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 FAM32AQ9Y421 112 aaKnown RBP12.73□□□□□ -0.37
SMCR8-201ENST00000406438 CASZ1Q86V15 1759 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 KRT16P08779 473 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 CDK17Q00537 523 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 FAM47EQ6ZV65 393 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 RHOT1Q8IXI2 618 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 POLR3FQ9H1D9 316 aaPredicted RBP12.73□□□□□ -0.37
SMCR8-201ENST00000406438 DHX35Q9H5Z1 703 aaKnown RBP12.73□□□□□ -0.37
SMCR8-201ENST00000406438 TMEM161AQ9NX61 479 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 STK36Q9NRP7 1315 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 C5orf58C9J3I9 102 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 TRAPPC3O43617 180 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 SRGAP2O75044 1071 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 TYK2P29597 1187 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 BCAR1P56945 870 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 RASGRF1Q13972 1273 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 SLC9A5Q14940 896 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 BTBD8Q5XKL5 378 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 PLEKHM3Q6ZWE6 761 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 RAD54LQ92698 747 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 SPON2Q9BUD6 331 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 BFARQ9NZS9 450 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 AATKQ6ZMQ8 1374 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 CCDC159P0C7I6 412 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 COASYQ13057 564 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 PFKFB3Q16875 520 aaPredicted RBP12.73□□□□□ -0.37
SMCR8-201ENST00000406438 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMCR8-201ENST00000406438 NFKBIL1Q9UBC1 381 aaPredicted RBP12.73□□□□□ -0.37
SMCR8-201ENST00000406438 PFASO15067 1338 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 A0A087WWV3 80 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 CCDC78A2IDD5 438 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 FTLP02792 175 aaPredicted RBP12.73□□□□□ -0.37
SMCR8-201ENST00000406438 LCP1P13796 627 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 HMOX2P30519 316 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 ANKRD40Q6AI12 368 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 ZFP42Q96MM3 310 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 PPP1R2P1Q96PQ5 205 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 ANGPT2O15123 496 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 CARSP49589 748 aaKnown RBP12.73□□□□□ -0.37
SMCR8-201ENST00000406438 SYTL3Q4VX76 610 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 UNC5CLQ8IV45 518 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 WDR48Q8TAF3 677 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 PCSK1NQ9UHG2 260 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 CEP170Q5SW79 1584 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 UTYO14607 1347 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 USP17L10C9JJH3 530 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 SLC16A4O15374 487 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 PPP2R2AP63151 447 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 CCDC137Q6PK04 289 aaKnown RBP12.73□□□□□ -0.37
SMCR8-201ENST00000406438 TRPC7Q9HCX4 862 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 FAM217BQ9NTX9 383 aaPredicted RBP12.73□□□□□ -0.37
SMCR8-201ENST00000406438 TRAF3IP3Q9Y228 551 aa12.73□□□□□ -0.37
SMCR8-201ENST00000406438 GMNCA6NCL1 334 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 HNRNPRO43390 633 aaKnown RBP12.72□□□□□ -0.37
SMCR8-201ENST00000406438 AP3M2P53677 418 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 CLEC4GQ6UXB4 293 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 DGKHQ86XP1 1220 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 TNIP3Q96KP6 325 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 RAVER2Q9HCJ3 691 aaKnown RBP12.72□□□□□ -0.37
SMCR8-201ENST00000406438 FBXL5Q9UKA1 691 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 EIF3DO15371 548 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMCR8-201ENST00000406438 C21orf2O43822 256 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 TAF1DQ9H5J8 278 aaPredicted RBP12.72□□□□□ -0.37
SMCR8-201ENST00000406438 RGL1Q9NZL6 768 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 MAP3K4Q9Y6R4 1608 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 POTEMA6NI47 508 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 FOXP2O15409 715 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 PRCPP42785 496 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 ZNF560Q96MR9 790 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 GOLPH3LQ9H4A5 285 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 ANTXR1Q9H6X2 564 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 PSMD3O43242 534 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 MMP10P09238 476 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 KCNA2P16389 499 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 TPI1P60174 286 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 DEPDC1Q5TB30 811 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 SWSAP1Q6NVH7 229 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 SPATA2LQ8IUW3 424 aaPredicted RBP12.72□□□□□ -0.37
SMCR8-201ENST00000406438 OLFM3Q96PB7 478 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 LXNQ9BS40 222 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 SLC9A1P19634 815 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 PDIA2Q13087 525 aaKnown RBP12.72□□□□□ -0.37
SMCR8-201ENST00000406438 GABBR1Q9UBS5 961 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms