RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 PPIP5K2O43314 1243 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 RAD17O75943 681 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 DRD4P21917 467 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 YWHABP31946 246 aaKnown RBP10.61□□□□□ -0.71
MSH2-202ENST00000406134 SOX10P56693 466 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 PGM5Q15124 567 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 FAM160B2Q86V87 743 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 RHOT2Q8IXI1 618 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 C12orf50Q8NA57 414 aaPredicted RBP10.61□□□□□ -0.71
MSH2-202ENST00000406134 MTMR14Q8NCE2 650 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 DHX38Q92620 1227 aaKnown RBP10.61□□□□□ -0.71
MSH2-202ENST00000406134 TRIM7Q9C029 511 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 GOLGA8IPA6NC78 632 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 GOLGA8JA6NMD2 632 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 DNM1LO00429 736 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 SLC16A4O15374 487 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 CYP26A1O43174 497 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 RTN2O75298 545 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 DHX34Q14147 1143 aaKnown RBP10.61□□□□□ -0.71
MSH2-202ENST00000406134 MIER3Q7Z3K6 550 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 HAUS6Q7Z4H7 955 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 ANKS1BQ7Z6G8 1248 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 CCDC26Q8TAB7 109 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 CHURC1Q8WUH1 139 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 TATDN2Q93075 761 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 TAAR1Q96RJ0 339 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 RPS6KC1Q96S38 1066 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 PDLIM7Q9NR12 457 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 SNX24Q9Y343 169 aa10.61□□□□□ -0.71
MSH2-202ENST00000406134 UTP11Q9Y3A2 253 aaKnown RBP10.61□□□□□ -0.71
MSH2-202ENST00000406134 ERLIN2O94905 339 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 EGFRP00533 1210 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 RARAP10276 462 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 ERMARDQ5T6L9 678 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 RHBDF2Q6PJF5 856 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 C15orf39Q6ZRI6 1047 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 XXYLT1Q8NBI6 393 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 PABPC3Q9H361 631 aaKnown RBP10.6□□□□□ -0.71
MSH2-202ENST00000406134 SEMA4AQ9H3S1 761 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 SLC38A10Q9HBR0 1119 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 PPANQ9NQ55 473 aaKnown RBP10.6□□□□□ -0.71
MSH2-202ENST00000406134 PNMA2Q9UL42 364 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 SYNGAP1Q96PV0 1343 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 FAM187AA6NFU0 413 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 E7EVH7 732 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 PPP1R12BO60237 982 aaPredicted RBP10.6□□□□□ -0.71
MSH2-202ENST00000406134 RGS20O76081 388 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 APBA3O96018 575 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 IVDP26440 423 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 MMP13P45452 471 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 GPC3P51654 580 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 GPC5P78333 572 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 IFI35P80217 286 aaPredicted RBP10.6□□□□□ -0.71
MSH2-202ENST00000406134 RASA3Q14644 834 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 SUGP1Q8IWZ8 645 aaKnown RBP10.6□□□□□ -0.71
MSH2-202ENST00000406134 MICALL1Q8N3F8 863 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 PARD3BQ8TEW8 1205 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 ZNF516Q92618 1163 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 ART4Q93070 314 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 ACCSQ96QU6 501 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 TMEM206Q9H813 350 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 EFCC1Q9HA90 598 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 CCPG1Q9ULG6 757 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 NEU2Q9Y3R4 380 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 MROH7Q68CQ1 1323 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 GMNCA6NCL1 334 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 ZNF862O60290 1169 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 CYP11B1P15538 503 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 QARSP47897 775 aaKnown RBP10.6□□□□□ -0.71
MSH2-202ENST00000406134 MAP2K1Q02750 393 aaPredicted RBP10.6□□□□□ -0.71
MSH2-202ENST00000406134 MTMR3Q13615 1198 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 NBPF9Q3BBW0 867 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 LLGL2Q6P1M3 1020 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 MAP4K3Q8IVH8 894 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 C4orf19Q8IY42 314 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 SAAL1Q96ER3 474 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 MFSD14AQ96MC6 490 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 HAPLN2Q9GZV7 340 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 PTPRJQ12913 1337 aa10.6□□□□□ -0.71
MSH2-202ENST00000406134 O00370 1275 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 GZMAP12544 262 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 UNGP13051 313 aaPredicted RBP10.59□□□□□ -0.71
MSH2-202ENST00000406134 HNRNPH1P31943 449 aaKnown RBP10.59□□□□□ -0.71
MSH2-202ENST00000406134 PMS2P54278 862 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 SNRNP35Q16560 246 aaKnown RBP10.59□□□□□ -0.71
MSH2-202ENST00000406134 FKBP1CQ5VVH2 108 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 TAS1R2Q8TE23 839 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 PSMD1Q99460 953 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 TBX20Q9UMR3 447 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 RASSF9O75901 435 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 CFHP08603 1231 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 PEX3P56589 373 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 MKRN4PQ13434 485 aaPredicted RBP10.59□□□□□ -0.71
MSH2-202ENST00000406134 SLC29A2Q14542 456 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 SYCP3Q8IZU3 236 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 CNKSR1Q969H4 720 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 RIPK3Q9Y572 518 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 OTOFQ9HC10 1997 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 NPTX2P47972 431 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 ACTN3Q08043 901 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms