RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ANKLE1Q8NAG6 615 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 ERMNQ8TAM6 284 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 SLC5A5Q92911 643 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 UTP4Q969X6 686 aaKnown RBP10.25□□□□□ -0.77
SMC1B-202ENST00000404354 ZNF653Q96CK0 615 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 HERPUD2Q9BSE4 406 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 KCNMB3Q9NPA1 279 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 AAASQ9NRG9 546 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 NKIRAS1Q9NYS0 192 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 LRP5O75197 1615 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 RASA4BC9J798 803 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 O00370 1275 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 RASA4O43374 803 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 GDF11O95390 407 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 CFBP00751 764 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 GM2AP17900 193 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 TM4SF1P30408 202 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 PPP4CP60510 307 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 NFIAQ12857 509 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 OVGP1Q12889 678 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 ARHGAP27Q6ZUM4 889 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 SLC13A5Q86YT5 568 aaPredicted RBP10.25□□□□□ -0.77
SMC1B-202ENST00000404354 DTX3LQ8TDB6 740 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 DHX38Q92620 1227 aaKnown RBP10.25□□□□□ -0.77
SMC1B-202ENST00000404354 NAF1Q96HR8 494 aaKnown RBP10.25□□□□□ -0.77
SMC1B-202ENST00000404354 IFT74Q96LB3 600 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 NUDCD1Q96RS6 583 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 MTUS1Q9ULD2 1270 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 NAALADL1Q9UQQ1 740 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 USTQ9Y2C2 406 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 PASKQ96RG2 1323 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 A0A0A6YYK5 440 aaPredicted RBP10.25□□□□□ -0.77
SMC1B-202ENST00000404354 MSH4O15457 936 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 CTCFP49711 727 aaPredicted RBP10.25□□□□□ -0.77
SMC1B-202ENST00000404354 SLC8A3P57103 927 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 KLF6Q99612 283 aaPredicted RBP10.25□□□□□ -0.77
SMC1B-202ENST00000404354 SPATS2LQ9NUQ6 558 aaKnown RBP10.25□□□□□ -0.77
SMC1B-202ENST00000404354 TMEM150BA6NC51 233 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 GOLGA8RI6L899 631 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 SMIM24O75264 130 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 CLK2P49760 499 aaKnown RBP10.24□□□□□ -0.77
SMC1B-202ENST00000404354 GPC5P78333 572 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 DOK7Q18PE1 504 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 CRELD2Q6UXH1 353 aaPredicted RBP10.24□□□□□ -0.77
SMC1B-202ENST00000404354 MAB21L3Q8N8X9 362 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 TBC1D16Q8TBP0 767 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 SERPINB13Q9UIV8 391 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 R3HDM2Q9Y2K5 976 aaKnown RBP10.24□□□□□ -0.77
SMC1B-202ENST00000404354 GPR75-ASB3A0A0A6YYF3 556 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 GOLGA8SH3BPF8 625 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 GOLGA8MH3BSY2 632 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 PODXLO00592 558 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 SMNDC1O75940 238 aaKnown RBP eCLIP10.24□□□□□ -0.77
SMC1B-202ENST00000404354 LINGO3P0C6S8 592 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 RPA1P27694 616 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 ZNF131P52739 623 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 PPP3CAQ08209 521 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 SPIRE1Q08AE8 756 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 SLMAPQ14BN4 828 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 KAZNQ674X7 775 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 ZNF564Q8TBZ8 553 aaPredicted RBP10.24□□□□□ -0.77
SMC1B-202ENST00000404354 KIAA1683Q9H0B3 1180 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 NENFQ9UMX5 172 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 DAGLAQ9Y4D2 1042 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 SYNGAP1Q96PV0 1343 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 ITGB4P16144 1822 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 MEIS2O14770 477 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 KRT15P19012 456 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 MXRA7P84157 204 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 MIGA2Q7L4E1 593 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 EPM2AIP1Q7L775 607 aaPredicted RBP10.24□□□□□ -0.77
SMC1B-202ENST00000404354 GSTA5Q7RTV2 222 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 APBB1IPQ7Z5R6 666 aaPredicted RBP10.24□□□□□ -0.77
SMC1B-202ENST00000404354 NOP9Q86U38 636 aaKnown RBP10.24□□□□□ -0.77
SMC1B-202ENST00000404354 HAUS1Q96CS2 278 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 CBWD1Q9BRT8 395 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 STMN4Q9H169 189 aaPredicted RBP10.24□□□□□ -0.77
SMC1B-202ENST00000404354 ANAPC5Q9UJX4 755 aa10.24□□□□□ -0.77
SMC1B-202ENST00000404354 PAPPAQ13219 1627 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 BANF1O75531 89 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 GJB6O95452 261 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 EEF2P13639 858 aaKnown RBP10.23□□□□□ -0.77
SMC1B-202ENST00000404354 RBM5P52756 815 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMC1B-202ENST00000404354 NPEPPSP55786 919 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 RIPK1Q13546 671 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 GALNTL6Q49A17 601 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 CLEC4GQ6UXB4 293 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 RNF217Q8TC41 542 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 RXFP1Q9HBX9 757 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 ARHGEF3Q9NR81 526 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 AGPAT3Q9NRZ7 376 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 PCDHA3Q9Y5H8 950 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 ARAP2Q8WZ64 1704 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 ZSCAN5DPP0CG00 497 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 PSMC4P43686 418 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 PEX5P50542 639 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 SLFN13Q68D06 897 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 ETNPPLQ8TBG4 499 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 FBF1Q8TES7 1133 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 CKAP2Q8WWK9 683 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms