RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 CNTNAP2Q9UHC6 1331 aa13.33□□□□□ -0.28
SPTLC1P3-201ENST00000403408 FASNP49327 2511 aaKnown RBP13.33□□□□□ -0.28
SPTLC1P3-201ENST00000403408 IGF2RP11717 2491 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 WDFY3Q8IZQ1 3526 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 KANSL1LA0AUZ9 987 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 M0R2N6 131 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 ZBTB39O15060 712 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 ADAM12O43184 909 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 LILRB5O75023 590 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 ZMYND10O75800 440 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 FSHRP23945 695 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 IGFBP6P24592 240 aaPredicted RBP13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 DNM2P50570 870 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 USP11P51784 963 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 CSTF1Q05048 431 aaKnown RBP13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 LAMTOR4Q0VGL1 99 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 NPY5RQ15761 445 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 TSGA10IPQ3SY00 556 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 SLC44A4Q53GD3 710 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 RTP2Q5QGT7 225 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 PRSS55Q6UWB4 352 aaPredicted RBP13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 RDM1Q8NG50 284 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 TBCKQ8TEA7 893 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 CPB2Q96IY4 423 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 PAAF1Q9BRP4 392 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 CXCL16Q9H2A7 254 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 PLEKHA4Q9H4M7 779 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 DHX33Q9H6R0 707 aaKnown RBP13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 SPATA6Q9NWH7 488 aaPredicted RBP13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 ZDHHC7Q9NXF8 308 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 KANSL3Q9P2N6 904 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 STK39Q9UEW8 545 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 NID2Q14112 1375 aa13.32□□□□□ -0.28
SPTLC1P3-201ENST00000403408 CYP3A7-CYP3A51PA0A087WV96 503 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 FAM170BA6NMN3 283 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 NRG2O14511 850 aaPredicted RBP13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 TSPAN1O60635 241 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 TDGF1P13385 188 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 ITGA4P13612 1032 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 CYP3A7P24462 503 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 TARSP26639 723 aaKnown RBP13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 RCAN1P53805 252 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 MLF2Q15773 248 aaPredicted RBP13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 AMHR2Q16671 573 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 FUT10Q6P4F1 479 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 SRGAP1Q7Z6B7 1085 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 ZNF687Q8N1G0 1237 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 CLSTN3Q9BQT9 956 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 PLA2G2FQ9BZM2 168 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 EPC1Q9H2F5 836 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 PIDD1Q9HB75 910 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 LTB4R2Q9NPC1 389 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 FNIP2Q9P278 1114 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 FBXO4Q9UKT5 387 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 VAV3Q9UKW4 847 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 CDH7Q9ULB5 785 aa13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 NAP1L2Q9ULW6 460 aaPredicted RBP13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 SMG5Q9UPR3 1016 aaKnown RBP13.31□□□□□ -0.28
SPTLC1P3-201ENST00000403408 ARID2Q68CP9 1835 aa13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 SLC37A4O43826 429 aa13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 GNA11P29992 359 aa13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 PSMC5P62195 406 aa13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 UBXN2BQ14CS0 331 aa13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 FGF13Q92913 245 aa13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 CLDN23Q96B33 292 aa13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 NXF3Q9H4D5 531 aaKnown RBP13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 XPNPEP1Q9NQW7 623 aa13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 HCFC1R1Q9NWW0 138 aa13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 NCDNQ9UBB6 729 aa13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 FBXW11Q9UKB1 542 aa13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 RALYQ9UKM9 306 aaKnown RBP13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 SSX2IPQ9Y2D8 614 aa13.3□□□□□ -0.28
SPTLC1P3-201ENST00000403408 SPTLC1O15269 473 aa13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 CCL16O15467 120 aa13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 LAMTOR5O43504 91 aa13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 C1RP00736 705 aa13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 AKAP5P24588 427 aa13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 Q6ZUG5 572 aa13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 FERMT3Q86UX7 667 aa13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 CDR2LQ86X02 465 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 RNF149Q8NC42 400 aa13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 BRF1Q92994 677 aa13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 KXD1Q9BQD3 176 aa13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 APOL6Q9BWW8 343 aa13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 NCOA5Q9HCD5 579 aaKnown RBP13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 PRMT8Q9NR22 394 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 PCDHGA2Q9Y5H1 932 aa13.29□□□□□ -0.28
SPTLC1P3-201ENST00000403408 B4GALT5O43286 388 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 PRKCQQ04759 706 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 USP41Q3LFD5 358 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 GPR65Q8IYL9 337 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 LNX1Q8TBB1 728 aaPredicted RBP13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 ASAP3Q8TDY4 903 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 HASPINQ8TF76 798 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 CCDC12Q8WUD4 166 aaPredicted RBP13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 PSPC1Q8WXF1 523 aaKnown RBP13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 SHDQ96IW2 340 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 CEP170P1Q96L14 293 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 AIFM3Q96NN9 605 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 SLC26A6Q9BXS9 759 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms