RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 GHITMQ9H3K2 345 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 KIAA1468Q9P260 1216 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 MAP10Q9P2G4 905 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 EDARQ9UNE0 448 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 AP1M2Q9Y6Q5 423 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 SLX4Q8IY92 1834 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 CNTNAP4Q9C0A0 1308 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 TJP1Q07157 1748 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 A0A1W2PRU2 124 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 LRRC14BA6NHZ5 514 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 M0R2C6 588 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ST8SIA5O15466 376 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 AOC2O75106 756 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 RPS6KA4O75676 772 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 URI1O94763 535 aaPredicted RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 CKMT1AP12532 417 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ZNF24P17028 368 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ALOX12P18054 663 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 FGFR4P22455 802 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 MAPK3P27361 379 aaPredicted RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 HOXC9P31274 260 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 CA8P35219 290 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 HSD17B2P37059 387 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 EPS15P42566 896 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 PRIM2P49643 509 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 GSK3AP49840 483 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 USP4Q13107 963 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ZNF460Q14592 562 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ARL13BQ3SXY8 428 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 CFAP100Q494V2 611 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 TRAPPC3LQ5T215 181 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 WDR73Q6P4I2 378 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ELMSAN1Q6PJG2 1045 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 XKR5Q6UX68 686 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 NUDT18Q6ZVK8 323 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 KRT74Q7RTS7 529 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 NME9Q86XW9 330 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 PTRH1Q86Y79 214 aaKnown RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 LINC00469Q8N7U9 141 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ZBTB34Q8NCN2 500 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 FBXO27Q8NI29 283 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 OTUD7AQ8TE49 926 aaPredicted RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 HDAC7Q8WUI4 952 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 LTV1Q96GA3 475 aaPredicted RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 COG3Q96JB2 828 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 CAPNS2Q96L46 248 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ARHGAP39Q9C0H5 1083 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 TSPAN10Q9H1Z9 355 aaPredicted RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 VPS28Q9UK41 221 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 APOBEC2Q9Y235 224 aaKnown RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 GPSM3Q9Y4H4 160 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 PCDH11XQ9BZA7 1347 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 PCDH11YQ9BZA8 1340 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 USP42Q9H9J4 1324 aaKnown RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 EDC4Q6P2E9 1401 aaKnown RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 GPR75-ASB3A0A0A6YYF3 556 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 PI4K2BG5E9Z4 385 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ZEB2O60315 1214 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ZNF254O75437 659 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 SLC22A3O75751 556 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 DDNO94850 711 aaPredicted RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ENDOD1O94919 500 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 PAPLNO95428 1278 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ADRB2P07550 413 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 CYP2A6P11509 494 aaPredicted RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 BPIP17213 487 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 POU3F2P20265 443 aaPredicted RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 TNFSF4P23510 183 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 POLD2P49005 469 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ALDH3A2P51648 485 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ARFIP1P53367 373 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 CCNA1P78396 465 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 NUCB2P80303 420 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ADAM15Q13444 863 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 PROSER3Q2NL68 480 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 INAVAQ3KP66 663 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 CEP55Q53EZ4 464 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 KRBOX4Q5JUW0 171 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 DGKKQ5KSL6 1271 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 MCTP1Q6DN14 999 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 DESI1Q6ICB0 168 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 CCDC33Q8N5R6 958 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ZBTB44Q8NCP5 570 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 CTCFLQ8NI51 663 aaPredicted RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ADAM32Q8TC27 787 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 RRP36Q96EU6 259 aaKnown RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 EPSTI1Q96J88 318 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 EYA3Q99504 573 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ACO2Q99798 780 aaKnown RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ZPBPQ9BS86 351 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 HERC2P3Q9BVR0 1158 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 GGNBP2Q9H3C7 697 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 MROH8Q9H579 483 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 CCDC177Q9NQR7 707 aaPredicted RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 PTBP2Q9UKA9 531 aaKnown RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 SLC13A4Q9UKG4 626 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 ATP11BQ9Y2G3 1177 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 CAB39Q9Y376 341 aaPredicted RBP4.27□□□□□ -1.73
CLHC1-201ENST00000401408 TMED5Q9Y3A6 229 aa4.27□□□□□ -1.73
CLHC1-201ENST00000401408 RTCBQ9Y3I0 505 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms