RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 PEX3P56589 373 aa17.49■□□□□ 0.39
ATG4B-203ENST00000400772 GRIN1Q05586 938 aa17.49■□□□□ 0.39
ATG4B-203ENST00000400772 PTPN14Q15678 1187 aa17.49■□□□□ 0.39
ATG4B-203ENST00000400772 TMEM119Q4V9L6 283 aa17.49■□□□□ 0.39
ATG4B-203ENST00000400772 TAS1R1Q7RTX1 841 aa17.49■□□□□ 0.39
ATG4B-203ENST00000400772 HACE1Q8IYU2 909 aa17.49■□□□□ 0.39
ATG4B-203ENST00000400772 SYT2Q8N9I0 419 aaPredicted RBP17.49■□□□□ 0.39
ATG4B-203ENST00000400772 CXCL16Q9H2A7 254 aa17.49■□□□□ 0.39
ATG4B-203ENST00000400772 SNTG2Q9NY99 539 aa17.49■□□□□ 0.39
ATG4B-203ENST00000400772 PRG3Q9Y2Y8 225 aaPredicted RBP17.49■□□□□ 0.39
ATG4B-203ENST00000400772 BDP1A6H8Y1 2624 aa17.49■□□□□ 0.39
ATG4B-203ENST00000400772 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-203ENST00000400772 VPS37CA5D8V6 355 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-203ENST00000400772 CA8P35219 290 aa17.48■□□□□ 0.39
ATG4B-203ENST00000400772 OR1G1P47890 313 aa17.48■□□□□ 0.39
ATG4B-203ENST00000400772 SLC12A3P55017 1021 aa17.48■□□□□ 0.39
ATG4B-203ENST00000400772 GIT2Q14161 759 aa17.48■□□□□ 0.39
ATG4B-203ENST00000400772 BMS1Q14692 1282 aaKnown RBP17.48■□□□□ 0.39
ATG4B-203ENST00000400772 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
ATG4B-203ENST00000400772 TAS1R3Q7RTX0 852 aa17.48■□□□□ 0.39
ATG4B-203ENST00000400772 RNF168Q8IYW5 571 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-203ENST00000400772 KCTD17Q8N5Z5 321 aa17.48■□□□□ 0.39
ATG4B-203ENST00000400772 LRRC15Q8TF66 581 aa17.48■□□□□ 0.39
ATG4B-203ENST00000400772 ZMYM2Q9UBW7 1377 aa17.48■□□□□ 0.39
ATG4B-203ENST00000400772 CCDC169A6NNP5 214 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 SFI1A8K8P3 1242 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 K7ERI5 159 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 SYT1P21579 422 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 GUCY2CP25092 1073 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 CABP7Q86V35 215 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 SLC22A17Q8WUG5 538 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 CASP10Q92851 521 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 INTS4Q96HW7 963 aaKnown RBP17.47■□□□□ 0.39
ATG4B-203ENST00000400772 AK8Q96MA6 479 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 DRC1Q96MC2 740 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 APOL5Q9BWW9 433 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 C1QTNF1Q9BXJ1 281 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 NT5C3AQ9H0P0 336 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 TMEM134Q9H6X4 195 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 C11orf16Q9NQ32 467 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 ARHGAP28Q9P2N2 729 aa17.47■□□□□ 0.39
ATG4B-203ENST00000400772 PTGESO14684 152 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 BMP15O95972 392 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 SOD2P04179 222 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 SSBP05455 408 aaKnown RBP eCLIP17.46■□□□□ 0.39
ATG4B-203ENST00000400772 PLA2G4BP0C869 781 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 SRGAP2BP0DMP2 458 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 EPCAMP16422 314 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 HOXB8P17481 243 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-203ENST00000400772 PDCP20941 246 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 RAD51AP2Q09MP3 1159 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 GRIK3Q13003 919 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 RESTQ13127 1097 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 DMP1Q13316 513 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-203ENST00000400772 PTPAQ15257 358 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 NAB2Q15742 525 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 TMEM132AQ24JP5 1023 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 ARSHQ5FYA8 562 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 ATF7IP2Q5U623 682 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 RABGGTAQ92696 567 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 KLHL5Q96PQ7 755 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 ADPGKQ9BRR6 497 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 NTPCRQ9BSD7 190 aaKnown RBP17.46■□□□□ 0.39
ATG4B-203ENST00000400772 HERC2P3Q9BVR0 1158 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 TIPINQ9BVW5 301 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 C17orf75Q9HAS0 396 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 PTPRHQ9HD43 1115 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 KMT5AQ9NQR1 393 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 CACNG4Q9UBN1 327 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 STK39Q9UEW8 545 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 CDH22Q9UJ99 828 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 CLIC4Q9Y696 253 aa17.46■□□□□ 0.39
ATG4B-203ENST00000400772 TDRD15B5MCY1 1934 aaKnown RBP17.46■□□□□ 0.39
ATG4B-203ENST00000400772 NPHP3-ACAD11A0A0J9YXS1 232 aa17.45■□□□□ 0.38
ATG4B-203ENST00000400772 LOC730098B7Z3J9 87 aa17.45■□□□□ 0.38
ATG4B-203ENST00000400772 SLC16A4O15374 487 aa17.45■□□□□ 0.38
ATG4B-203ENST00000400772 RECQL4O94761 1208 aa17.45■□□□□ 0.38
ATG4B-203ENST00000400772 CNPP09543 421 aaKnown RBP17.45■□□□□ 0.38
ATG4B-203ENST00000400772 KIAA0319Q5VV43 1072 aa17.45■□□□□ 0.38
ATG4B-203ENST00000400772 FAM173BQ6P4H8 233 aa17.45■□□□□ 0.38
ATG4B-203ENST00000400772 POP1Q99575 1024 aaKnown RBP17.45■□□□□ 0.38
ATG4B-203ENST00000400772 ACO2Q99798 780 aaKnown RBP17.45■□□□□ 0.38
ATG4B-203ENST00000400772 PAAF1Q9BRP4 392 aa17.45■□□□□ 0.38
ATG4B-203ENST00000400772 COLEC11Q9BWP8 271 aa17.45■□□□□ 0.38
ATG4B-203ENST00000400772 PHF7Q9BWX1 381 aaPredicted RBP17.45■□□□□ 0.38
ATG4B-203ENST00000400772 FOXD4L1Q9NU39 408 aa17.45■□□□□ 0.38
ATG4B-203ENST00000400772 BLOC1S4Q9NUP1 217 aa17.45■□□□□ 0.38
ATG4B-203ENST00000400772 TNFSF13BQ9Y275 285 aa17.45■□□□□ 0.38
ATG4B-203ENST00000400772 PHLPP2Q6ZVD8 1323 aa17.45■□□□□ 0.38
ATG4B-203ENST00000400772 K7ELQ4 463 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-203ENST00000400772 ABLIM1O14639 778 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 SLC26A4O43511 780 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 PLS3P13797 630 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 LONP1P36776 959 aaKnown RBP17.44■□□□□ 0.38
ATG4B-203ENST00000400772 UBA7P41226 1012 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 CBX2Q14781 532 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-203ENST00000400772 DCAF4L1Q3SXM0 396 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 KANK3Q6NY19 840 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 C12orf76Q8N812 135 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-203ENST00000400772 FEZF2Q8TBJ5 459 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms