RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 TSC2P49815 1807 aa17.03■□□□□ 0.32
ATG4B-202ENST00000400771 TRIOO75962 3097 aa17.02■□□□□ 0.32
ATG4B-202ENST00000400771 C2orf71A6NGG8 1288 aa17.02■□□□□ 0.32
ATG4B-202ENST00000400771 PTGESO14684 152 aa17.02■□□□□ 0.32
ATG4B-202ENST00000400771 PER2O15055 1255 aa17.02■□□□□ 0.32
ATG4B-202ENST00000400771 LIG1P18858 919 aa17.02■□□□□ 0.32
ATG4B-202ENST00000400771 MARCKSP29966 332 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-202ENST00000400771 NASPP49321 788 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-202ENST00000400771 ALDH7A1P49419 539 aaKnown RBP17.02■□□□□ 0.32
ATG4B-202ENST00000400771 DMP1Q13316 513 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-202ENST00000400771 NAB2Q15742 525 aa17.02■□□□□ 0.32
ATG4B-202ENST00000400771 DDX53Q86TM3 631 aaKnown RBP17.02■□□□□ 0.32
ATG4B-202ENST00000400771 PPP2R3CQ969Q6 453 aa17.02■□□□□ 0.32
ATG4B-202ENST00000400771 TMEM169Q96HH4 297 aa17.02■□□□□ 0.32
ATG4B-202ENST00000400771 EPSTI1Q96J88 318 aa17.02■□□□□ 0.32
ATG4B-202ENST00000400771 CDK5RAP3Q96JB5 506 aa17.02■□□□□ 0.32
ATG4B-202ENST00000400771 TRIM6Q9C030 488 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-202ENST00000400771 CCSER1Q9C0I3 900 aa17.02■□□□□ 0.32
ATG4B-202ENST00000400771 CD320Q9NPF0 282 aa17.02■□□□□ 0.32
ATG4B-202ENST00000400771 KCND2Q9NZV8 630 aa17.02■□□□□ 0.32
ATG4B-202ENST00000400771 SFI1A8K8P3 1242 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 TNFRSF10AO00220 468 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 RECQL4O94761 1208 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 SSBP05455 408 aaKnown RBP eCLIP17.01■□□□□ 0.31
ATG4B-202ENST00000400771 PROZP22891 400 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 NCBP1Q09161 790 aaKnown RBP17.01■□□□□ 0.31
ATG4B-202ENST00000400771 PKP1Q13835 747 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 CLUL1Q15846 466 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 SPECC1Q5M775 1068 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 ATF7IP2Q5U623 682 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 CEP120Q8N960 986 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 SMRP1Q8NCR6 262 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 TMEM161BQ8NDZ6 487 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 SPIRE2Q8WWL2 714 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 AUTS2Q8WXX7 1259 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 RAD54LQ92698 747 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 KCNN1Q92952 543 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 CLIC6Q96NY7 704 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 CDCA3Q99618 268 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-202ENST00000400771 REEP2Q9BRK0 252 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 CDT1Q9H211 546 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 TMEM134Q9H6X4 195 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 C17orf75Q9HAS0 396 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 PTPRHQ9HD43 1115 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 NGRNQ9NPE2 291 aaKnown RBP17.01■□□□□ 0.31
ATG4B-202ENST00000400771 KLK14Q9P0G3 267 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 KANSL3Q9P2N6 904 aa17.01■□□□□ 0.31
ATG4B-202ENST00000400771 SRPRBQ9Y5M8 271 aaKnown RBP17.01■□□□□ 0.31
ATG4B-202ENST00000400771 CARNS1A5YM72 827 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 CCDC169A6NNP5 214 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 NRP1O14786 923 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 SLC16A4O15374 487 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 MBTPS2O43462 519 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 CTSAP10619 480 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 PLS3P13797 630 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 UBA7P41226 1012 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 NDUFV1P49821 464 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 ZNF131P52739 623 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 NCKAP1LP55160 1127 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 CEBPZQ03701 1054 aaKnown RBP17■□□□□ 0.31
ATG4B-202ENST00000400771 KRT17Q04695 432 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 GRIK3Q13003 919 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 COASYQ13057 564 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 MCM6Q14566 821 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 SMC1AQ14683 1233 aaKnown RBP17■□□□□ 0.31
ATG4B-202ENST00000400771 PTPN14Q15678 1187 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 DCAF4L1Q3SXM0 396 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 EP400NLQ6ZTU2 488 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 GPBP1Q86WP2 473 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 FAM178BQ8IXR5 827 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 VPS52Q8N1B4 723 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 CALML4Q96GE6 196 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 FIZ1Q96SL8 496 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 ACO2Q99798 780 aaKnown RBP17■□□□□ 0.31
ATG4B-202ENST00000400771 NTPCRQ9BSD7 190 aaKnown RBP17■□□□□ 0.31
ATG4B-202ENST00000400771 ZSCAN16Q9H4T2 348 aaPredicted RBP17■□□□□ 0.31
ATG4B-202ENST00000400771 TLE6Q9H808 572 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 KMT5AQ9NQR1 393 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 SNTG2Q9NY99 539 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 CACNG4Q9UBN1 327 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 PUF60Q9UHX1 559 aaKnown RBP17■□□□□ 0.31
ATG4B-202ENST00000400771 TNFSF13BQ9Y275 285 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 PRG3Q9Y2Y8 225 aaPredicted RBP17■□□□□ 0.31
ATG4B-202ENST00000400771 IRAK3Q9Y616 596 aa17■□□□□ 0.31
ATG4B-202ENST00000400771 A0A087X0B3 334 aa16.99■□□□□ 0.31
ATG4B-202ENST00000400771 MEFVO15553 781 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-202ENST00000400771 MAPTP10636 758 aaKnown RBP16.99■□□□□ 0.31
ATG4B-202ENST00000400771 SMAD4Q13485 552 aaKnown RBP16.99■□□□□ 0.31
ATG4B-202ENST00000400771 SLC39A14Q15043 492 aa16.99■□□□□ 0.31
ATG4B-202ENST00000400771 TMEM184AQ6ZMB5 413 aa16.99■□□□□ 0.31
ATG4B-202ENST00000400771 TMC7Q7Z402 723 aa16.99■□□□□ 0.31
ATG4B-202ENST00000400771 HACE1Q8IYU2 909 aa16.99■□□□□ 0.31
ATG4B-202ENST00000400771 MRPL43Q8N983 215 aaKnown RBP16.99■□□□□ 0.31
ATG4B-202ENST00000400771 MICAL1Q8TDZ2 1067 aa16.99■□□□□ 0.31
ATG4B-202ENST00000400771 LARP4BQ92615 738 aaKnown RBP16.99■□□□□ 0.31
ATG4B-202ENST00000400771 KHSRPQ92945 711 aaKnown RBP eCLIP16.99■□□□□ 0.313e-7■■□□□ 12.3
ATG4B-202ENST00000400771 PAAF1Q9BRP4 392 aa16.99■□□□□ 0.31
ATG4B-202ENST00000400771 HERC2P3Q9BVR0 1158 aa16.99■□□□□ 0.31
ATG4B-202ENST00000400771 TARS2Q9BW92 718 aaKnown RBP16.99■□□□□ 0.31
ATG4B-202ENST00000400771 CD207Q9UJ71 328 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms