RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 NKD2Q969F2 451 aaPredicted RBP13.28□□□□□ -0.28
LINC00544-201ENST00000400540 CSRNP2Q9H175 543 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 ZSWIM4Q9H7M6 989 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 RXFP1Q9HBX9 757 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 WDR6Q9NNW5 1121 aaKnown RBP13.28□□□□□ -0.28
LINC00544-201ENST00000400540 UBN1Q9NPG3 1134 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 PDRG1Q9NUG6 133 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 CA14Q9ULX7 337 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 GVINP1Q7Z2Y8 2422 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 PTPRZ1P23471 2315 aaPredicted RBP13.27□□□□□ -0.28
LINC00544-201ENST00000400540 TBX3O15119 743 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 ASAP2O43150 1006 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 MARCH6O60337 910 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 SLITRK3O94933 977 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 ARF4P18085 180 aaPredicted RBP13.27□□□□□ -0.29
LINC00544-201ENST00000400540 RPL17P18621 184 aaKnown RBP13.27□□□□□ -0.29
LINC00544-201ENST00000400540 AKAP5P24588 427 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 DSG1Q02413 1049 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 NR5A1Q13285 461 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 OTUD6AQ7L8S5 288 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 TPH2Q8IWU9 490 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 DTWD2Q8NBA8 298 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 GSTCDQ8NEC7 633 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 SMG7Q92540 1137 aaKnown RBP13.27□□□□□ -0.29
LINC00544-201ENST00000400540 GPR62Q9BZJ7 368 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 TM6SF1Q9BZW5 370 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 CHST7Q9NS84 486 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 KLK14Q9P0G3 267 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 IGSF9Q9P2J2 1179 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 STK36Q9NRP7 1315 aa13.27□□□□□ -0.29
LINC00544-201ENST00000400540 A0A087WWV3 80 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 WNT7AO00755 349 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 TGM5O43548 720 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 CTDNEP1O95476 244 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 NPTXRO95502 500 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 GLRA2P23416 452 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 AXLP30530 894 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 FUT10Q6P4F1 479 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 GET4Q7L5D6 327 aaPredicted RBP13.26□□□□□ -0.29
LINC00544-201ENST00000400540 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
LINC00544-201ENST00000400540 ADSSL1Q8N142 457 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 CCDC51Q96ER9 411 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 EIF2AK1Q9BQI3 630 aaKnown RBP13.26□□□□□ -0.29
LINC00544-201ENST00000400540 RTP3Q9BQQ7 232 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 TRIM6Q9C030 488 aaPredicted RBP13.26□□□□□ -0.29
LINC00544-201ENST00000400540 EPS15L1Q9UBC2 864 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 TPCN1Q9ULQ1 816 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 SSX2IPQ9Y2D8 614 aa13.26□□□□□ -0.29
LINC00544-201ENST00000400540 STK25O00506 426 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 CDKL5O76039 1030 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 ARL2P36404 184 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 TFDP1Q14186 410 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 MXD4Q14582 209 aaPredicted RBP13.25□□□□□ -0.29
LINC00544-201ENST00000400540 PRSS55Q6UWB4 352 aaPredicted RBP13.25□□□□□ -0.29
LINC00544-201ENST00000400540 SLFN12Q8IYM2 578 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 SLC44A3Q8N4M1 653 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 GPR152Q8TDT2 470 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 HASPINQ8TF76 798 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 RIN2Q8WYP3 895 aaPredicted RBP13.25□□□□□ -0.29
LINC00544-201ENST00000400540 STAMQ92783 540 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 TNFRSF25Q93038 417 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 PAAF1Q9BRP4 392 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 RHOBTB2Q9BYZ6 727 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 NT5C3AQ9H0P0 336 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 ADAM28Q9UKQ2 775 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 GIT1Q9Y2X7 761 aa13.25□□□□□ -0.29
LINC00544-201ENST00000400540 PFKFB2O60825 505 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 PAPLNO95428 1278 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 BAG4O95429 457 aaKnown RBP13.24□□□□□ -0.29
LINC00544-201ENST00000400540 SRFP11831 508 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 XBP1P17861 261 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 RARRES1P49788 294 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 FOSBP53539 338 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 PCBP1Q15365 356 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC00544-201ENST00000400540 SPECC1Q5M775 1068 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 RTP2Q5QGT7 225 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 SLC27A1Q6PCB7 646 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 LILRA6Q6PI73 481 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 CYP26C1Q6V0L0 522 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 PIGOQ8TEQ8 1089 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 NAP1L4Q99733 375 aaKnown RBP13.24□□□□□ -0.29
LINC00544-201ENST00000400540 HSD17B14Q9BPX1 270 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 COLEC11Q9BWP8 271 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 POLR3FQ9H1D9 316 aaPredicted RBP13.24□□□□□ -0.29
LINC00544-201ENST00000400540 CXCL16Q9H2A7 254 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 TBC1D17Q9HA65 648 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 PIDD1Q9HB75 910 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 GPRC5CQ9NQ84 441 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 WNT16Q9UBV4 365 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 PARP2Q9UGN5 583 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 DPP7Q9UHL4 492 aa13.24□□□□□ -0.29
LINC00544-201ENST00000400540 PDCD11Q14690 1871 aaKnown RBP13.24□□□□□ -0.29
LINC00544-201ENST00000400540 CACNA1AO00555 2505 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 CACNA1IQ9P0X4 2223 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 TTLL13PA6NNM8 815 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 EPB41L2O43491 1005 aaKnown RBP13.23□□□□□ -0.29
LINC00544-201ENST00000400540 USO1O60763 962 aaKnown RBP13.23□□□□□ -0.29
LINC00544-201ENST00000400540 NR1I2O75469 434 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 DGAT1O75907 488 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 LYPLA2O95372 231 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms