RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 GDAP1L1Q96MZ0 367 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 THAP2Q9H0W7 228 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 DIS3Q9Y2L1 958 aaKnown RBP16.99■□□□□ 0.31
CDC42-203ENST00000400259 SOWAHBA6NEL2 793 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 TMCO5BA8MYB1 307 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 ZC3H11AO75152 810 aaKnown RBP eCLIP16.98■□□□□ 0.313e-13■□□□□ 9.7
CDC42-203ENST00000400259 UBA1P22314 1058 aaKnown RBP16.98■□□□□ 0.31
CDC42-203ENST00000400259 ARL2P36404 184 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 IREB2P48200 963 aaKnown RBP16.98■□□□□ 0.31
CDC42-203ENST00000400259 RPUSD2Q8IZ73 545 aaKnown RBP16.98■□□□□ 0.31
CDC42-203ENST00000400259 PPM1KQ8N3J5 372 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 NT5C1BQ96P26 610 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 RAB20Q9NX57 234 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 ADM5C9JUS6 153 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 EXTL3O43909 919 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 CEP104O60308 925 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 RTN2O75298 545 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 FARP2O94887 1054 aaPredicted RBP16.98■□□□□ 0.31
CDC42-203ENST00000400259 GLI1P08151 1106 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 TGFB3P10600 412 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 CHRNB2P17787 502 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 ABCB4P21439 1286 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 NAMPTP43490 491 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 PRPF4BQ13523 1007 aaKnown RBP16.98■□□□□ 0.31
CDC42-203ENST00000400259 C15orf39Q6ZRI6 1047 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 SEPT14Q6ZU15 432 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 SV2AQ7L0J3 742 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 KRT12Q99456 494 aa16.98■□□□□ 0.31
CDC42-203ENST00000400259 SEPT11Q9NVA2 429 aaKnown RBP16.98■□□□□ 0.31
CDC42-203ENST00000400259 GSTTP1A0A1W2PQM5 241 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 ZNF233A6NK53 670 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 CCDC188H7C350 402 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 CXCL11O14625 94 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 SORBS3O60504 671 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 HEXIM1O94992 359 aaKnown RBP16.97■□□□□ 0.31
CDC42-203ENST00000400259 RFC5P40937 340 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 NEDD9Q14511 834 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 TARBP2Q15633 366 aaKnown RBP16.97■□□□□ 0.31
CDC42-203ENST00000400259 DLK2Q6UY11 383 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 NOP9Q86U38 636 aaKnown RBP16.97■□□□□ 0.31
CDC42-203ENST00000400259 EIF1ADQ8N9N8 165 aaKnown RBP16.97■□□□□ 0.31
CDC42-203ENST00000400259 TAS1R2Q8TE23 839 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 AFAP1L1Q8TED9 768 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 CCDC102AQ96A19 550 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 EXOC4Q96A65 974 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 BICD1Q96G01 975 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 FAM81BQ96LP2 452 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 POP1Q99575 1024 aaKnown RBP16.97■□□□□ 0.31
CDC42-203ENST00000400259 TOPORSQ9NS56 1045 aaPredicted RBP16.97■□□□□ 0.31
CDC42-203ENST00000400259 PSD3Q9NYI0 1048 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 COG5Q9UP83 839 aa16.97■□□□□ 0.31
CDC42-203ENST00000400259 NOC2LQ9Y3T9 749 aaKnown RBP16.97■□□□□ 0.31
CDC42-203ENST00000400259 DDX3YO15523 660 aaKnown RBP16.96■□□□□ 0.31
CDC42-203ENST00000400259 MTA2O94776 668 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 SGPL1O95470 568 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 SYF2O95926 243 aaKnown RBP16.96■□□□□ 0.31
CDC42-203ENST00000400259 FTLP02792 175 aaPredicted RBP16.96■□□□□ 0.31
CDC42-203ENST00000400259 GLRA2P23416 452 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 C11orf63Q6NUN7 778 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 GADL1Q6ZQY3 521 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 ENOSF1Q7L5Y1 443 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 ERO1BQ86YB8 467 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 ASAP3Q8TDY4 903 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 PCYT2Q99447 389 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 ADAM21Q9UKJ8 722 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 PPME1Q9Y570 386 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 BHMG1C9JSJ3 638 aaPredicted RBP16.96■□□□□ 0.31
CDC42-203ENST00000400259 CNMDO75829 334 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 LIG4P49917 911 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 IRX3P78415 501 aaPredicted RBP16.96■□□□□ 0.31
CDC42-203ENST00000400259 GCNT1Q02742 428 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 STRN3Q13033 797 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 PAK2Q13177 524 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 PSMD6Q15008 389 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 SND1Q7KZF4 910 aaKnown RBP eCLIP16.96■□□□□ 0.313e-6■■□□□ 11.7
CDC42-203ENST00000400259 PSPC1Q8WXF1 523 aaKnown RBP16.96■□□□□ 0.31
CDC42-203ENST00000400259 SLC7A3Q8WY07 619 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.96■□□□□ 0.31
CDC42-203ENST00000400259 PCDHB18PQ96TA0 734 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 FAM213AQ9BRX8 229 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 KCNH4Q9UQ05 1017 aa16.96■□□□□ 0.31
CDC42-203ENST00000400259 SPDYE5A6NIY4 337 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 CYP26A1O43174 497 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 PEX10O60683 326 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 SLC25A27O95847 323 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 GPC5P78333 572 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 NCAPG2Q86XI2 1143 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 TMEM143Q96AN5 459 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 ASCC2Q9H1I8 757 aaPredicted RBP16.95■□□□□ 0.3
CDC42-203ENST00000400259 CARD9Q9H257 536 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 RAD51CO43502 376 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 COPB2P35606 906 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 USP8P40818 1118 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 RNASE9P60153 205 aaKnown RBP16.95■□□□□ 0.3
CDC42-203ENST00000400259 FMO1Q01740 532 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 FAM160B1Q5W0V3 765 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 SLFN12LQ6IEE8 588 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 SLC47A2Q86VL8 602 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 ANKRD13AQ8IZ07 590 aa16.95■□□□□ 0.3
CDC42-203ENST00000400259 TMEM134Q9H6X4 195 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms