RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 PCDHB7Q9Y5E2 793 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 PCDHB2Q9Y5E7 798 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 INO80B-WBP1J3KQ70 363 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 PMM2O15305 246 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 SYN1P17600 705 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 LAG3P18627 525 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 PPM1AP35813 382 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 DSC1Q08554 894 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 KNOP1Q1ED39 458 aaKnown RBP8.24□□□□□ -1.09
USP16-204ENST00000399976 KMT5BQ4FZB7 885 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 ZCWPW2Q504Y3 356 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 HERC4Q5GLZ8 1057 aaPredicted RBP8.24□□□□□ -1.09
USP16-204ENST00000399976 SMARCE1Q969G3 411 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 SYAP1Q96A49 352 aaPredicted RBP8.24□□□□□ -1.09
USP16-204ENST00000399976 KCTD10Q9H3F6 313 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 MRPL44Q9H9J2 332 aaKnown RBP8.24□□□□□ -1.09
USP16-204ENST00000399976 MSRAQ9UJ68 235 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 PIN4Q9Y237 131 aaKnown RBP8.24□□□□□ -1.09
USP16-204ENST00000399976 C2CD2Q9Y426 696 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 SLC16A4O15374 487 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 SLC16A3O15427 465 aaKnown RBP8.23□□□□□ -1.09
USP16-204ENST00000399976 XPOTO43592 962 aaKnown RBP8.23□□□□□ -1.09
USP16-204ENST00000399976 STAU1O95793 577 aaKnown RBP8.23□□□□□ -1.09
USP16-204ENST00000399976 CAVIN2O95810 425 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 LINC00271P0C7V0 271 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 PLCB3Q01970 1234 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 CENPPQ6IPU0 288 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 KSR1Q8IVT5 923 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 URGCPQ8TCY9 931 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 CASD1Q96PB1 797 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 CCDC94Q9BW85 323 aaPredicted RBP8.23□□□□□ -1.09
USP16-204ENST00000399976 CDT1Q9H211 546 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 DACH1Q9UI36 760 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 CPSF3Q9UKF6 684 aaKnown RBP8.23□□□□□ -1.09
USP16-204ENST00000399976 IPPQ9Y573 584 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 MTCL1Q9Y4B5 1905 aaKnown RBP8.23□□□□□ -1.09
USP16-204ENST00000399976 CCDC169A6NNP5 214 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 NR1I2O75469 434 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 CAPN15O75808 1086 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 SSBP05455 408 aaKnown RBP eCLIP8.23□□□□□ -1.09
USP16-204ENST00000399976 RPL9P32969 192 aaKnown RBP8.23□□□□□ -1.09
USP16-204ENST00000399976 MCM4P33991 863 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 MARSP56192 900 aaKnown RBP8.23□□□□□ -1.09
USP16-204ENST00000399976 KLHL40Q2TBA0 621 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 RTL10Q7L3V2 364 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 MYOCDQ8IZQ8 938 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 PDILTQ8N807 584 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 SCFD1Q8WVM8 642 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 SNX27Q96L92 541 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 GBP3Q9H0R5 595 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 RSAD1Q9HA92 442 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 KIAA1468Q9P260 1216 aa8.23□□□□□ -1.09
USP16-204ENST00000399976 CALUO43852 315 aaPredicted RBP8.22□□□□□ -1.09
USP16-204ENST00000399976 EXTL3O43909 919 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 OFD1O75665 1012 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 ITGA4P13612 1032 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 LIG1P18858 919 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 LRPAP1P30533 357 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 CHMP4BP1P59074 171 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 STIM1Q13586 685 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 C9orf50Q5SZB4 431 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 TWF2Q6IBS0 349 aaKnown RBP8.22□□□□□ -1.09
USP16-204ENST00000399976 SLC39A4Q6P5W5 647 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 DEFB128Q7Z7B8 93 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 RNF168Q8IYW5 571 aaPredicted RBP8.22□□□□□ -1.09
USP16-204ENST00000399976 MLKLQ8NB16 471 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 KIAA0895Q8NCT3 520 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 ZBTB10Q96DT7 871 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 DDX27Q96GQ7 796 aaKnown RBP8.22□□□□□ -1.09
USP16-204ENST00000399976 CEP63Q96MT8 703 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 LRFN2Q9ULH4 789 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 MAFFQ9ULX9 164 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 NPHP3-ACAD11A0A0J9YXS1 232 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 BICDL2A1A5D9 508 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 CLDN3O15551 220 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 EDN1P05305 212 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 GTF2H1P32780 548 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 LIG4P49917 911 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 CREMQ03060 361 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 ZBTB6Q15916 424 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 PDXDC1Q6P996 788 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 GLB1LQ6UWU2 654 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 CHRDL2Q6WN34 429 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 AGMOQ6ZNB7 445 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 HS2ST1Q7LGA3 356 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 DYMQ7RTS9 669 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 USP37Q86T82 979 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 BRSK2Q8IWQ3 736 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 ADSSL1Q8N142 457 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 TMC2Q8TDI7 906 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 PLIN2Q99541 437 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 BPIFA3Q9BQP9 254 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 RHOBTB2Q9BYZ6 727 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 SSX2IPQ9Y2D8 614 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 DAAM1Q9Y4D1 1078 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 TTC26A0AVF1 554 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 ARHGEF37A1IGU5 675 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 GADD45BO75293 160 aaPredicted RBP8.22□□□□□ -1.09
USP16-204ENST00000399976 GCNT3O95395 438 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 RPL13P26373 211 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms