RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 O00370 1275 aa15□□□□□ -0.01
APOB-202ENST00000399256 ECEL1O95672 775 aa15□□□□□ -0.01
APOB-202ENST00000399256 GYS1P13807 737 aa15□□□□□ -0.01
APOB-202ENST00000399256 STX2P32856 288 aa15□□□□□ -0.01
APOB-202ENST00000399256 TAF11Q15544 211 aa15□□□□□ -0.01
APOB-202ENST00000399256 GPATCH4Q5T3I0 446 aaKnown RBP15□□□□□ -0.01
APOB-202ENST00000399256 RINT1Q6NUQ1 792 aa15□□□□□ -0.01
APOB-202ENST00000399256 RNF207Q6ZRF8 634 aa15□□□□□ -0.01
APOB-202ENST00000399256 TRMT10CQ7L0Y3 403 aaKnown RBP15□□□□□ -0.01
APOB-202ENST00000399256 CYFIP1Q7L576 1253 aa15□□□□□ -0.01
APOB-202ENST00000399256 ANKLE1Q8NAG6 615 aa15□□□□□ -0.01
APOB-202ENST00000399256 SLC17A8Q8NDX2 589 aa15□□□□□ -0.01
APOB-202ENST00000399256 C1orf54Q8WWF1 131 aa15□□□□□ -0.01
APOB-202ENST00000399256 MBOAT7Q96N66 472 aa15□□□□□ -0.01
APOB-202ENST00000399256 PRKAG3Q9UGI9 489 aa15□□□□□ -0.01
APOB-202ENST00000399256 ENO4A6NNW6 628 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 EML1O00423 815 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 ZBTB39O15060 712 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 SPOPO43791 374 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 ABL2P42684 1182 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 GPC5P78333 572 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 GABPAQ06546 454 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 TRIP13Q15645 432 aaPredicted RBP14.99□□□□□ -0.01
APOB-202ENST00000399256 TRIM68Q6AZZ1 485 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 FAM47EQ6ZV65 393 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 MIGA2Q7L4E1 593 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 ZNF483Q8TF39 744 aaPredicted RBP14.99□□□□□ -0.01
APOB-202ENST00000399256 SERPINB12Q96P63 405 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 UBE2TQ9NPD8 197 aaPredicted RBP14.99□□□□□ -0.01
APOB-202ENST00000399256 FRMD4BQ9Y2L6 1034 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 MEIS2O14770 477 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 UFL1O94874 794 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 GPSM2P81274 684 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 SIX1Q15475 284 aaPredicted RBP14.99□□□□□ -0.01
APOB-202ENST00000399256 KYNUQ16719 465 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 ECHDC2Q86YB7 292 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 CYP4X1Q8N118 509 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 CYP2W1Q8TAV3 490 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 LENG9Q96B70 501 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 PWWP2AQ96N64 755 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 EIF2AK1Q9BQI3 630 aaKnown RBP14.99□□□□□ -0.01
APOB-202ENST00000399256 YIPF3Q9GZM5 350 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 DNAJC18Q9H819 358 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 KLHL14Q9P2G3 628 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 ASIC3Q9UHC3 531 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 GGPS1O95749 300 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 KRT17Q04695 432 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 ARHGEF19Q8IW93 802 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 TRIM7Q9C029 511 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 DDX4Q9NQI0 724 aaKnown RBP14.99□□□□□ -0.01
APOB-202ENST00000399256 OLFML3Q9NRN5 406 aa14.99□□□□□ -0.01
APOB-202ENST00000399256 NKX1-2Q9UD57 310 aaPredicted RBP14.99□□□□□ -0.01
APOB-202ENST00000399256 TP73O15350 636 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 MSH4O15457 936 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 EYA4O95677 639 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 HADHBP55084 474 aaKnown RBP14.98□□□□□ -0.01
APOB-202ENST00000399256 GRAPQ13588 217 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 CYP1B1Q16678 543 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 ZNF568Q3ZCX4 644 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 SRRM1Q8IYB3 904 aaKnown RBP14.98□□□□□ -0.01
APOB-202ENST00000399256 GRAPLQ8TC17 118 aaPredicted RBP14.98□□□□□ -0.01
APOB-202ENST00000399256 UTP4Q969X6 686 aaKnown RBP14.98□□□□□ -0.01
APOB-202ENST00000399256 CLDN3O15551 220 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 ATP5DP30049 168 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 RNASELQ05823 741 aaKnown RBP14.98□□□□□ -0.01
APOB-202ENST00000399256 BLMHQ13867 455 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 USH1GQ495M9 461 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 SAAL1Q96ER3 474 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 PCDHB18PQ96TA0 734 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 PAIP2Q9BPZ3 127 aaKnown RBP14.98□□□□□ -0.01
APOB-202ENST00000399256 ACP6Q9NPH0 428 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 AGPAT3Q9NRZ7 376 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 DAGLAQ9Y4D2 1042 aa14.98□□□□□ -0.01
APOB-202ENST00000399256 TNRC6CQ9HCJ0 1690 aaKnown RBP14.98□□□□□ -0.01
APOB-202ENST00000399256 CHMP2AO43633 222 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 CETPP11597 493 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 GAP43P17677 238 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 DLG4P78352 724 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 NSMFQ6X4W1 530 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 HS2ST1Q7LGA3 356 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 TPH2Q8IWU9 490 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 RPS6KC1Q96S38 1066 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 PLCD4Q9BRC7 762 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 WNT8AQ9H1J5 351 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 CORO1CQ9ULV4 474 aaPredicted RBP14.97□□□□□ -0.01
APOB-202ENST00000399256 EIF3DO15371 548 aaKnown RBP eCLIP14.97□□□□□ -0.01
APOB-202ENST00000399256 EXOC3O60645 756 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 CCNB1P14635 433 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 VPS41P49754 854 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 ATG4AQ8WYN0 398 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 KAT5Q92993 513 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 CD101Q93033 1021 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 TMEM237Q96Q45 408 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 VAV3Q9UKW4 847 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 THAP12O43422 761 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 UNC5CO95185 931 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 CRYGNQ8WXF5 182 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 MKNK1Q9BUB5 465 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 OSBPL1AQ9BXW6 950 aa14.97□□□□□ -0.01
APOB-202ENST00000399256 MYLK2Q9H1R3 596 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms