RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 ITGA4P13612 1032 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 SEZ6Q53EL9 994 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 CLEC17AQ6ZS10 378 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 UNC13DQ70J99 1090 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 CCDC65Q8IXS2 484 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 CNNM3Q8NE01 707 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 GSTCDQ8NEC7 633 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 ZFP42Q96MM3 310 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 LRRC27Q9C0I9 530 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 OLFML3Q9NRN5 406 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 SEL1LQ9UBV2 794 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 USP25Q9UHP3 1055 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 KCNG1Q9UIX4 513 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 INPP5FQ9Y2H2 1132 aa17.31■□□□□ 0.36
MBD1-207ENST00000398488 TMEM265A0A087WTH1 108 aa17.3■□□□□ 0.36
MBD1-207ENST00000398488 GTPBP6O43824 516 aaPredicted RBP17.3■□□□□ 0.36
MBD1-207ENST00000398488 PRPF6O94906 941 aaKnown RBP17.3■□□□□ 0.36
MBD1-207ENST00000398488 PBX3P40426 434 aa17.3■□□□□ 0.36
MBD1-207ENST00000398488 FAM160A1Q05DH4 1040 aa17.3■□□□□ 0.36
MBD1-207ENST00000398488 STRN3Q13033 797 aa17.3■□□□□ 0.36
MBD1-207ENST00000398488 ADGRE1Q14246 886 aa17.3■□□□□ 0.36
MBD1-207ENST00000398488 MAP4K3Q8IVH8 894 aa17.3■□□□□ 0.36
MBD1-207ENST00000398488 ERCC4Q92889 916 aaPredicted RBP17.3■□□□□ 0.36
MBD1-207ENST00000398488 CLP1Q92989 425 aaKnown RBP17.3■□□□□ 0.36
MBD1-207ENST00000398488 TGS1Q96RS0 853 aaKnown RBP17.3■□□□□ 0.36
MBD1-207ENST00000398488 GAD1Q99259 594 aa17.3■□□□□ 0.36
MBD1-207ENST00000398488 TRIM6Q9C030 488 aaPredicted RBP17.3■□□□□ 0.36
MBD1-207ENST00000398488 RSAD1Q9HA92 442 aa17.3■□□□□ 0.36
MBD1-207ENST00000398488 LPXNO60711 386 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 GCNT3O95395 438 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 PIGRP01833 764 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 HARSP12081 509 aaKnown RBP17.29■□□□□ 0.36
MBD1-207ENST00000398488 MLH1P40692 756 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 OSTNP61366 133 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 DPYDQ12882 1025 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 ZNF568Q3ZCX4 644 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 KMT5BQ4FZB7 885 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 EPC2Q52LR7 807 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 ZBTB41Q5SVQ8 909 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 MPZL3Q6UWV2 235 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 ZPBP2Q6X784 338 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 EPM2AIP1Q7L775 607 aaPredicted RBP17.29■□□□□ 0.36
MBD1-207ENST00000398488 ZNF280BQ86YH2 543 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 PGBD4Q96DM1 585 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 CDX2Q99626 313 aaPredicted RBP17.29■□□□□ 0.36
MBD1-207ENST00000398488 TBC1D13Q9NVG8 400 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 ANKFY1Q9P2R3 1169 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 PLAGL2Q9UPG8 496 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 GDAQ9Y2T3 454 aa17.29■□□□□ 0.36
MBD1-207ENST00000398488 NLRC5Q86WI3 1866 aa17.28■□□□□ 0.36
MBD1-207ENST00000398488 ARL5CA6NH57 179 aa17.28■□□□□ 0.36
MBD1-207ENST00000398488 H0YCG3 227 aa17.28■□□□□ 0.36
MBD1-207ENST00000398488 DDHD2O94830 711 aa17.28■□□□□ 0.36
MBD1-207ENST00000398488 PNOCQ13519 176 aa17.28■□□□□ 0.36
MBD1-207ENST00000398488 NOMO2Q5JPE7 1267 aa17.28■□□□□ 0.36
MBD1-207ENST00000398488 FAM26FQ5R3K3 315 aa17.28■□□□□ 0.36
MBD1-207ENST00000398488 L1TD1Q5T7N2 865 aaKnown RBP17.28■□□□□ 0.36
MBD1-207ENST00000398488 ZSWIM2Q8NEG5 633 aa17.28■□□□□ 0.36
MBD1-207ENST00000398488 MYLIPQ8WY64 445 aa17.28■□□□□ 0.36
MBD1-207ENST00000398488 TCHPQ9BT92 498 aa17.28■□□□□ 0.36
MBD1-207ENST00000398488 SLC39A2Q9NP94 309 aa17.28■□□□□ 0.36
MBD1-207ENST00000398488 PARP2Q9UGN5 583 aa17.28■□□□□ 0.36
MBD1-207ENST00000398488 PVALEFA0A1B0GWK0 134 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 HOXA2O43364 376 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 FAM189A1O60320 539 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 TOM1L1O75674 476 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 RECQL4O94761 1208 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 POMCP01189 267 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 ADSSP30520 456 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 BMPR1AP36894 532 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 SCNN1GP51170 649 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 MCL1Q07820 350 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 STK4Q13043 487 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 DCAF4L1Q3SXM0 396 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 GLB1LQ6UWU2 654 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 THNSL1Q8IYQ7 743 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 ABI1Q8IZP0 508 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 KIAA0895Q8NCT3 520 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 GDPD5Q8WTR4 605 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 BICD1Q96G01 975 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 ADPGKQ9BRR6 497 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 NRDE2Q9H7Z3 1164 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 DNAJB4Q9UDY4 337 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 ZMYM2Q9UBW7 1377 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 MYO9BQ13459 2157 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 TRANK1O15050 2925 aa17.27■□□□□ 0.36
MBD1-207ENST00000398488 COL4A4P53420 1690 aaPredicted RBP17.27■□□□□ 0.35
MBD1-207ENST00000398488 PTGESO14684 152 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 HNRNPDLO14979 420 aaKnown RBP17.26■□□□□ 0.35
MBD1-207ENST00000398488 INPPL1O15357 1258 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 RPN1P04843 607 aaKnown RBP17.26■□□□□ 0.35
MBD1-207ENST00000398488 MCF2P10911 925 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 CTNNB1P35222 781 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 TNFSF9P41273 254 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 GRM5P41594 1212 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 LIG4P49917 911 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 CSPP1Q1MSJ5 1256 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 TMEM130Q8N3G9 435 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 SCFD1Q8WVM8 642 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 RNF216Q9NWF9 866 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms