RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 SLC44A3Q8N4M1 653 aa13.4□□□□□ -0.26
TFF3-202ENST00000398431 B3GALT6Q96L58 329 aa13.4□□□□□ -0.26
TFF3-202ENST00000398431 MYADMQ96S97 322 aa13.4□□□□□ -0.26
TFF3-202ENST00000398431 NAP1L4Q99733 375 aaKnown RBP13.4□□□□□ -0.26
TFF3-202ENST00000398431 EIF2AK1Q9BQI3 630 aaKnown RBP13.4□□□□□ -0.26
TFF3-202ENST00000398431 SSX2IPQ9Y2D8 614 aa13.4□□□□□ -0.26
TFF3-202ENST00000398431 GIT1Q9Y2X7 761 aa13.4□□□□□ -0.26
TFF3-202ENST00000398431 FAM186AA6NE01 2351 aa13.4□□□□□ -0.26
TFF3-202ENST00000398431 TDRD15B5MCY1 1934 aaKnown RBP13.4□□□□□ -0.26
TFF3-202ENST00000398431 KRBA1A5PL33 1030 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 INO80B-WBP1J3KQ70 363 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 B4GALT5O43286 388 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 MARCH6O60337 910 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 CDKL5O76039 1030 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 ERLIN2O94905 339 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 GLUD1P00367 558 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 ADH1AP07327 375 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 GLRA2P23416 452 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 AKAP5P24588 427 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 FRMD5Q7Z6J6 570 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 CDR2LQ86X02 465 aaPredicted RBP13.39□□□□□ -0.27
TFF3-202ENST00000398431 PALB2Q86YC2 1186 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 SLFN12Q8IYM2 578 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 RABGGTAQ92696 567 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 CCDC51Q96ER9 411 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 COLEC11Q9BWP8 271 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 NT5C3AQ9H0P0 336 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 NXF3Q9H4D5 531 aaKnown RBP13.39□□□□□ -0.27
TFF3-202ENST00000398431 ANKEF1Q9NU02 776 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 EPS15L1Q9UBC2 864 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 ORC3Q9UBD5 711 aaPredicted RBP13.39□□□□□ -0.27
TFF3-202ENST00000398431 WNT16Q9UBV4 365 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 PCDHA12Q9UN75 941 aa13.39□□□□□ -0.27
TFF3-202ENST00000398431 A0A1B0GUA9 196 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 TGM5O43548 720 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 DGAT1O75907 488 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 BAG4O95429 457 aaKnown RBP13.38□□□□□ -0.27
TFF3-202ENST00000398431 C1RP00736 705 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 XBP1P17861 261 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 RARRES1P49788 294 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 CCDC105Q8IYK2 499 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 GPR65Q8IYL9 337 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 SIX5Q8N196 739 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 DTWD2Q8NBA8 298 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 HDAC7Q8WUI4 952 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 APOL6Q9BWW8 343 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 NFKBIZQ9BYH8 718 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 CACNG4Q9UBN1 327 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 RBM19Q9Y4C8 960 aaKnown RBP13.38□□□□□ -0.27
TFF3-202ENST00000398431 SPTBN4Q9H254 2564 aa13.38□□□□□ -0.27
TFF3-202ENST00000398431 CFHP08603 1231 aa13.37□□□□□ -0.27
TFF3-202ENST00000398431 RPL17P18621 184 aaKnown RBP13.37□□□□□ -0.27
TFF3-202ENST00000398431 GBP2P32456 591 aaPredicted RBP13.37□□□□□ -0.27
TFF3-202ENST00000398431 TFDP1Q14186 410 aa13.37□□□□□ -0.27
TFF3-202ENST00000398431 FUT10Q6P4F1 479 aa13.37□□□□□ -0.27
TFF3-202ENST00000398431 PIGOQ8TEQ8 1089 aa13.37□□□□□ -0.27
TFF3-202ENST00000398431 SMG7Q92540 1137 aaKnown RBP13.37□□□□□ -0.27
TFF3-202ENST00000398431 NKD2Q969F2 451 aaPredicted RBP13.37□□□□□ -0.27
TFF3-202ENST00000398431 MTMR9Q96QG7 549 aa13.37□□□□□ -0.27
TFF3-202ENST00000398431 RTP3Q9BQQ7 232 aa13.37□□□□□ -0.27
TFF3-202ENST00000398431 PAAF1Q9BRP4 392 aa13.37□□□□□ -0.27
TFF3-202ENST00000398431 CXCL16Q9H2A7 254 aa13.37□□□□□ -0.27
TFF3-202ENST00000398431 PLEKHA4Q9H4M7 779 aa13.37□□□□□ -0.27
TFF3-202ENST00000398431 TTC12Q9H892 705 aaPredicted RBP13.37□□□□□ -0.27
TFF3-202ENST00000398431 KLK14Q9P0G3 267 aa13.37□□□□□ -0.27
TFF3-202ENST00000398431 FNIP2Q9P278 1114 aa13.37□□□□□ -0.27
TFF3-202ENST00000398431 FBXL21Q9UKT6 434 aa13.37□□□□□ -0.27
TFF3-202ENST00000398431 CLUHO75153 1309 aa13.37□□□□□ -0.27
TFF3-202ENST00000398431 MYO15AQ9UKN7 3530 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 TTLL13PA6NNM8 815 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 BTBD18B2RXH4 712 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 ANHXE9PGG2 379 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 NPTXRO95502 500 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 SPATA31C1P0DKV0 1188 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 XRCC6P12956 609 aaKnown RBP eCLIP13.36□□□□□ -0.27
TFF3-202ENST00000398431 LAMP2P13473 410 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 KRT2P35908 639 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 NCBP1Q09161 790 aaKnown RBP13.36□□□□□ -0.27
TFF3-202ENST00000398431 ANGPT1Q15389 498 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 USP41Q3LFD5 358 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 GLYCTKQ8IVS8 523 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 NECAB1Q8N987 351 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 NXPE3Q969Y0 559 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 PRKD2Q9BZL6 878 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 GPRC5CQ9NQ84 441 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 DPP7Q9UHL4 492 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 ADAM28Q9UKQ2 775 aa13.36□□□□□ -0.27
TFF3-202ENST00000398431 NR1I2O75469 434 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 ZMYND10O75800 440 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 LARGE1O95461 756 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 IGFBP6P24592 240 aaPredicted RBP13.35□□□□□ -0.27
TFF3-202ENST00000398431 TXKP42681 527 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 CALCRLQ16602 461 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 ME3Q16798 604 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 RTP2Q5QGT7 225 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 SLC27A1Q6PCB7 646 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 PRSS55Q6UWB4 352 aaPredicted RBP13.35□□□□□ -0.27
TFF3-202ENST00000398431 PPP4R3CPQ6ZMV5 832 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 ADSSL1Q8N142 457 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms