RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 PROZP22891 400 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 CMA1P23946 247 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 BCAR1P56945 870 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 GTF2BQ00403 316 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 CNNM4Q6P4Q7 775 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 MRPS27Q92552 414 aaKnown RBP15.67■□□□□ 0.1
HDDC2-202ENST00000398153 HVCN1Q96D96 273 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 DNAJC19Q96DA6 116 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 RNF39Q9H2S5 420 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 NSUN3Q9H649 340 aaKnown RBP15.67■□□□□ 0.1
HDDC2-202ENST00000398153 ALG13Q9NP73 1137 aaKnown RBP15.67■□□□□ 0.1
HDDC2-202ENST00000398153 OLFML3Q9NRN5 406 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 USP25Q9UHP3 1055 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 COG5Q9UP83 839 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 INPP5FQ9Y2H2 1132 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 HES2Q9Y543 173 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 PRRC2BQ5JSZ5 2229 aaKnown RBP15.66■□□□□ 0.1
HDDC2-202ENST00000398153 FRMD3A2A2Y4 597 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 PIGRP01833 764 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 EDN1P05305 212 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
HDDC2-202ENST00000398153 ALCAMQ13740 583 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 BMS1Q14692 1282 aaKnown RBP15.66■□□□□ 0.1
HDDC2-202ENST00000398153 KYAT1Q16773 422 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 LONRF3Q496Y0 759 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 MPZL3Q6UWV2 235 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 DYMQ7RTS9 669 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 CDR2LQ86X02 465 aaPredicted RBP15.66■□□□□ 0.1
HDDC2-202ENST00000398153 SLC39A11Q8N1S5 342 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 POF1BQ8WVV4 589 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 FIZ1Q96SL8 496 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 GAD1Q99259 594 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 TCHPQ9BT92 498 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 TARS2Q9BW92 718 aaKnown RBP15.66■□□□□ 0.1
HDDC2-202ENST00000398153 ZHX3Q9H4I2 956 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 NRDE2Q9H7Z3 1164 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 TOPORSQ9NS56 1045 aaPredicted RBP15.66■□□□□ 0.1
HDDC2-202ENST00000398153 PARP2Q9UGN5 583 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 KCNH3Q9ULD8 1083 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 CIZ1Q9ULV3 898 aaPredicted RBP15.66■□□□□ 0.1
HDDC2-202ENST00000398153 TBX20Q9UMR3 447 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 EYSQ5T1H1 3165 aa15.66■□□□□ 0.1
HDDC2-202ENST00000398153 K7ENM7 598 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 POLR2DO15514 142 aaKnown RBP15.65■□□□□ 0.1
HDDC2-202ENST00000398153 CLDN3O15551 220 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 ZC3H11AO75152 810 aaKnown RBP eCLIP15.65■□□□□ 0.1
HDDC2-202ENST00000398153 GALTP07902 379 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 AKAP5P24588 427 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 MLH1P40692 756 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 GRM5P41594 1212 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 DSC1Q08554 894 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 GRIK3Q13003 919 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 CAMK1Q14012 370 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 CCDC85BQ15834 202 aaPredicted RBP15.65■□□□□ 0.1
HDDC2-202ENST00000398153 ZNF568Q3ZCX4 644 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 EEF1DP3Q658K8 133 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 ZNF720Q7Z2F6 126 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 CCDC65Q8IXS2 484 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 GSTCDQ8NEC7 633 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 TMEM169Q96HH4 297 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 RPS6KC1Q96S38 1066 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 CCDC94Q9BW85 323 aaPredicted RBP15.65■□□□□ 0.1
HDDC2-202ENST00000398153 NGRNQ9NPE2 291 aaKnown RBP15.65■□□□□ 0.1
HDDC2-202ENST00000398153 TLR9Q9NR96 1032 aa15.65■□□□□ 0.1
HDDC2-202ENST00000398153 TDRD15B5MCY1 1934 aaKnown RBP15.64■□□□□ 0.09
HDDC2-202ENST00000398153 TCHHQ07283 1943 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 FAM237AA0A1B0GTK4 181 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 A0A1W2PQ27 194 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 A0A1W2PQ64 194 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 A0A1W2PQD8 194 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 ABLIM1O14639 778 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 DDHD2O94830 711 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 POMCP01189 267 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 ANP32AP39687 249 aaKnown RBP15.64■□□□□ 0.09
HDDC2-202ENST00000398153 YARSP54577 528 aaKnown RBP15.64■□□□□ 0.09
HDDC2-202ENST00000398153 MCL1Q07820 350 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 NOLC1Q14978 699 aaKnown RBP eCLIP15.64■□□□□ 0.094e-14■■■■□ 23.8
HDDC2-202ENST00000398153 AAK1Q2M2I8 961 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 DDX53Q86TM3 631 aaKnown RBP15.64■□□□□ 0.09
HDDC2-202ENST00000398153 ZNF280BQ86YH2 543 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 MAP4K3Q8IVH8 894 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 COLGALT2Q8IYK4 626 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 MICALL1Q8N3F8 863 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 ATXN2LQ8WWM7 1075 aaKnown RBP15.64■□□□□ 0.09
HDDC2-202ENST00000398153 PPM1EQ8WY54 764 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 DHX58Q96C10 678 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 BICD1Q96G01 975 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 IGSF21Q96ID5 467 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 C7orf25Q9BPX7 421 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 APOL6Q9BWW8 343 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 TRIM9Q9C026 710 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 CDT1Q9H211 546 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 PLXNA4Q9HCM2 1894 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 SNTG2Q9NY99 539 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 HCSTQ9UBK5 93 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 FAN1Q9Y2M0 1017 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 PCDHB13Q9Y5F0 798 aa15.64■□□□□ 0.09
HDDC2-202ENST00000398153 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.64■□□□□ 0.09
HDDC2-202ENST00000398153 REV3LO60673 3130 aa15.63■□□□□ 0.09
HDDC2-202ENST00000398153 HNRNPDLO14979 420 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms