RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 TRPV2Q9Y5S1 764 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 SQORQ9Y6N5 450 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 MROH7Q68CQ1 1323 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 PES1O00541 588 aaKnown RBP13.8□□□□□ -0.2
LMCD1-202ENST00000397386 OGTO15294 1046 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 PMM2O15305 246 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 FAM189A1O60320 539 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 STX10O60499 249 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 AFPP02771 609 aaKnown RBP13.8□□□□□ -0.2
LMCD1-202ENST00000397386 ARF4P18085 180 aaPredicted RBP13.8□□□□□ -0.2
LMCD1-202ENST00000397386 GJA8P48165 433 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 VAMP7P51809 220 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 RBL2Q08999 1139 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 TMEM132AQ24JP5 1023 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 TRIM71Q2Q1W2 868 aaKnown RBP13.8□□□□□ -0.2
LMCD1-202ENST00000397386 ZNF568Q3ZCX4 644 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 FAM26DQ5JW98 314 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 C1orf53Q5VUE5 145 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 FAM43BQ6ZT52 329 aaPredicted RBP13.8□□□□□ -0.2
LMCD1-202ENST00000397386 CBWD2Q8IUF1 395 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 SAAL1Q96ER3 474 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 ZBTB45Q96K62 511 aaPredicted RBP13.8□□□□□ -0.2
LMCD1-202ENST00000397386 HAPLN2Q9GZV7 340 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 TRMT13Q9NUP7 481 aaKnown RBP13.8□□□□□ -0.2
LMCD1-202ENST00000397386 GINS2Q9Y248 185 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 CDY2AQ9Y6F7 541 aa13.8□□□□□ -0.2
LMCD1-202ENST00000397386 CENPFP49454 3210 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 GOLGA8IPA6NC78 632 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 GOLGA8JA6NMD2 632 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 P4HA2O15460 535 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 B4GALT4O60513 344 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 N4BP1O75113 896 aaKnown RBP13.79□□□□□ -0.2
LMCD1-202ENST00000397386 CSDE1O75534 798 aaKnown RBP13.79□□□□□ -0.2
LMCD1-202ENST00000397386 MYCP01106 439 aaPredicted RBP13.79□□□□□ -0.2
LMCD1-202ENST00000397386 TFRCP02786 760 aaKnown RBP13.79□□□□□ -0.2
LMCD1-202ENST00000397386 ADRB2P07550 413 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 HOXA11P31270 313 aaPredicted RBP13.79□□□□□ -0.2
LMCD1-202ENST00000397386 MATR3P43243 847 aaKnown RBP eCLIP13.79□□□□□ -0.2
LMCD1-202ENST00000397386 CLDN10P78369 228 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 CYP24A1Q07973 514 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 MGAT3Q09327 533 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 TRIM14Q14142 442 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 DCAF4L1Q3SXM0 396 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 TCERG1LQ5VWI1 586 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 NOTUMQ6P988 496 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 CRELD2Q6UXH1 353 aaPredicted RBP13.79□□□□□ -0.2
LMCD1-202ENST00000397386 CATSPER4Q7RTX7 472 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 USP38Q8NB14 1042 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 RDH13Q8NBN7 331 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 PARD3BQ8TEW8 1205 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 TMEM40Q8WWA1 233 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 WNT8BQ93098 351 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 CCDC51Q96ER9 411 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 ADPGKQ9BRR6 497 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 FAM213AQ9BRX8 229 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 PDZD7Q9H5P4 517 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 AGPAT5Q9NUQ2 364 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 USP20Q9Y2K6 914 aa13.79□□□□□ -0.2
LMCD1-202ENST00000397386 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.79□□□□□ -0.2
LMCD1-202ENST00000397386 CHRNA1P02708 482 aa13.78□□□□□ -0.2
LMCD1-202ENST00000397386 GTF2H1P32780 548 aa13.78□□□□□ -0.2
LMCD1-202ENST00000397386 THPOP40225 353 aa13.78□□□□□ -0.2
LMCD1-202ENST00000397386 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
LMCD1-202ENST00000397386 GSDMDP57764 484 aa13.78□□□□□ -0.2
LMCD1-202ENST00000397386 PSMD6Q15008 389 aa13.78□□□□□ -0.2
LMCD1-202ENST00000397386 SURF1Q15526 300 aa13.78□□□□□ -0.2
LMCD1-202ENST00000397386 DCAF17Q5H9S7 520 aaPredicted RBP13.78□□□□□ -0.2
LMCD1-202ENST00000397386 SLC27A1Q6PCB7 646 aa13.78□□□□□ -0.2
LMCD1-202ENST00000397386 TMC6Q7Z403 805 aa13.78□□□□□ -0.2
LMCD1-202ENST00000397386 FAM126BQ8IXS8 530 aa13.78□□□□□ -0.2
LMCD1-202ENST00000397386 ZSWIM2Q8NEG5 633 aa13.78□□□□□ -0.2
LMCD1-202ENST00000397386 CAGE1Q8TC20 777 aa13.78□□□□□ -0.2
LMCD1-202ENST00000397386 DHX38Q92620 1227 aaKnown RBP13.78□□□□□ -0.2
LMCD1-202ENST00000397386 NUP58Q9BVL2 599 aa13.78□□□□□ -0.2
LMCD1-202ENST00000397386 CDT1Q9H211 546 aa13.78□□□□□ -0.2
LMCD1-202ENST00000397386 CPSF3Q9UKF6 684 aaKnown RBP13.78□□□□□ -0.2
LMCD1-202ENST00000397386 CD4P01730 458 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 CLTAP09496 248 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 COL6A1P12109 1028 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 FMO5P49326 533 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 ACOT2P49753 483 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 TBX2Q13207 712 aaPredicted RBP13.77□□□□□ -0.21
LMCD1-202ENST00000397386 HS1BP3Q53T59 392 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 FIGNQ5HY92 759 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 EEF1DP3Q658K8 133 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 ANKRD33Q7Z3H0 272 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 BRSK2Q8IWQ3 736 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 CCDC155Q8N6L0 562 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 SPC24Q8NBT2 197 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 TOX2Q96NM4 488 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 TRPV6Q9H1D0 765 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 CHST12Q9NRB3 414 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 SIK3Q9Y2K2 1263 aa13.77□□□□□ -0.21
LMCD1-202ENST00000397386 GPR182O15218 404 aa13.76□□□□□ -0.21
LMCD1-202ENST00000397386 RPS6KA5O75582 802 aa13.76□□□□□ -0.21
LMCD1-202ENST00000397386 KCNA4P22459 653 aa13.76□□□□□ -0.21
LMCD1-202ENST00000397386 AP3M2P53677 418 aa13.76□□□□□ -0.21
LMCD1-202ENST00000397386 CETN1Q12798 172 aa13.76□□□□□ -0.21
LMCD1-202ENST00000397386 SYCP1Q15431 976 aa13.76□□□□□ -0.21
LMCD1-202ENST00000397386 C1orf220Q5T0J3 134 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms