RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 GDAP1Q8TB36 358 aa25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 DYDC2Q96IM9 177 aa25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 SH2D3AQ9BRG2 576 aa25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 ETNK1Q9HBU6 452 aa25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 PODXLO00592 558 aa25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 SNUPNO95149 360 aaKnown RBP25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 CHRNA3P32297 505 aa25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 DLG4P78352 724 aa25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 PHLDB3Q6NSJ2 640 aa25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 TEX9Q8N6V9 391 aa25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 PRELID2Q8N945 189 aa25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.73■■□□□ 1.713e-10■■■■■ 28.7
CSNK1E-203ENST00000396832 VSTM1Q6UX27 236 aa25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 PKD2L1Q9P0L9 805 aa25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 CCNB1P14635 433 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 PECAM1P16284 738 aaPredicted RBP25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 CTCFP49711 727 aaPredicted RBP25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 MYL7Q01449 175 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 SLC17A8Q8NDX2 589 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 KAT5Q92993 513 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 STK33Q9BYT3 514 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 ROPN1BQ9BZX4 212 aaPredicted RBP25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 ROPN1Q9HAT0 212 aaPredicted RBP25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 ETAA1Q9NY74 926 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 PCDHA3Q9Y5H8 950 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 DPPA5A6NC42 116 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 HLA-DOAP06340 250 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 GBP1P32455 592 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 RWDD2BP57060 319 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 CKAP2Q8WWK9 683 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 BORCS6Q96GS4 357 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 VAV3Q9UKW4 847 aa25.72■■□□□ 1.71
CSNK1E-203ENST00000396832 SLC16A3O15427 465 aaKnown RBP25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 WFS1O76024 890 aa25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 FESP07332 822 aa25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 MGAT5Q09328 741 aa25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 CLUL1Q15846 466 aa25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 MEX3CQ5U5Q3 659 aaKnown RBP25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 UTP4Q969X6 686 aaKnown RBP25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 ANKRD27Q96NW4 1050 aa25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 KCNQ5Q9NR82 932 aa25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 KLHL14Q9P2G3 628 aa25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 PCYOX1Q9UHG3 505 aa25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 ACSL3O95573 720 aa25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 FTLP02792 175 aaPredicted RBP25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 CCDC137Q6PK04 289 aaKnown RBP25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 NSMFQ6X4W1 530 aa25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 RAB3IPQ96QF0 476 aaPredicted RBP25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 UBE2TQ9NPD8 197 aaPredicted RBP25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 LRRC42Q9Y546 428 aa25.71■■□□□ 1.71
CSNK1E-203ENST00000396832 DDX39AO00148 427 aaKnown RBP25.7■■□□□ 1.71
CSNK1E-203ENST00000396832 GH1P01241 217 aa25.7■■□□□ 1.71
CSNK1E-203ENST00000396832 GNAZP19086 355 aa25.7■■□□□ 1.71
CSNK1E-203ENST00000396832 RBM5P52756 815 aaKnown RBP eCLIP25.7■■□□□ 1.712e-8■■■□□ 16.5
CSNK1E-203ENST00000396832 CCDC105Q8IYK2 499 aa25.7■■□□□ 1.71
CSNK1E-203ENST00000396832 ZSWIM2Q8NEG5 633 aa25.7■■□□□ 1.71
CSNK1E-203ENST00000396832 RUNDC3BQ96NL0 473 aa25.7■■□□□ 1.71
CSNK1E-203ENST00000396832 DDX23Q9BUQ8 820 aaKnown RBP25.7■■□□□ 1.71
CSNK1E-203ENST00000396832 APEX2Q9UBZ4 518 aa25.7■■□□□ 1.71
CSNK1E-203ENST00000396832 PFASO15067 1338 aa25.7■■□□□ 1.7
CSNK1E-203ENST00000396832 CYP3A7-CYP3A51PA0A087WV96 503 aa25.7■■□□□ 1.7
CSNK1E-203ENST00000396832 AHCYL1O43865 530 aa25.7■■□□□ 1.7
CSNK1E-203ENST00000396832 EXOC3O60645 756 aa25.7■■□□□ 1.7
CSNK1E-203ENST00000396832 UNC5CO95185 931 aa25.7■■□□□ 1.7
CSNK1E-203ENST00000396832 NEFHP12036 1026 aa25.7■■□□□ 1.7
CSNK1E-203ENST00000396832 CYP3A7P24462 503 aa25.7■■□□□ 1.7
CSNK1E-203ENST00000396832 RC3H1Q5TC82 1133 aaKnown RBP25.7■■□□□ 1.7
CSNK1E-203ENST00000396832 FAM178BQ8IXR5 827 aa25.7■■□□□ 1.7
CSNK1E-203ENST00000396832 SYCP3Q8IZU3 236 aa25.7■■□□□ 1.7
CSNK1E-203ENST00000396832 ZMYND8Q9ULU4 1186 aaPredicted RBP25.7■■□□□ 1.7
CSNK1E-203ENST00000396832 FRMD4BQ9Y2L6 1034 aa25.7■■□□□ 1.7
CSNK1E-203ENST00000396832 ODR4Q5SWX8 454 aa25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 ANO7Q6IWH7 933 aa25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 ARHGEF19Q8IW93 802 aa25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 ART4Q93070 314 aa25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 TGS1Q96RS0 853 aaKnown RBP25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 CRAMP1Q96RY5 1269 aa25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 NAP1L4Q99733 375 aaKnown RBP25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 WRAP73Q9P2S5 460 aaPredicted RBP25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 CTNNAL1Q9UBT7 734 aa25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 DDTLA6NHG4 134 aaPredicted RBP25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 CFBP00751 764 aa25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 SKIV2L2P42285 1042 aaKnown RBP25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 SNX1Q13596 522 aa25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 SLC30A9Q6PML9 568 aa25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 FBXO11Q86XK2 927 aa25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 ANKLE1Q8NAG6 615 aa25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 AMNQ9BXJ7 453 aa25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 TAOK3Q9H2K8 898 aa25.69■■□□□ 1.7
CSNK1E-203ENST00000396832 EYA4O95677 639 aa25.68■■□□□ 1.7
CSNK1E-203ENST00000396832 COMTP21964 271 aa25.68■■□□□ 1.7
CSNK1E-203ENST00000396832 MPP2Q14168 576 aa25.68■■□□□ 1.7
CSNK1E-203ENST00000396832 TRIP13Q15645 432 aaPredicted RBP25.68■■□□□ 1.7
CSNK1E-203ENST00000396832 GNPTABQ3T906 1256 aa25.68■■□□□ 1.7
CSNK1E-203ENST00000396832 CGB2Q6NT52 195 aa25.68■■□□□ 1.7
CSNK1E-203ENST00000396832 AGPAT3Q9NRZ7 376 aa25.68■■□□□ 1.7
CSNK1E-203ENST00000396832 ECHDC2Q86YB7 292 aa25.68■■□□□ 1.7
CSNK1E-203ENST00000396832 PARVGQ9HBI0 331 aa25.68■■□□□ 1.7
CSNK1E-203ENST00000396832 SYNGAP1Q96PV0 1343 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms