RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ATXN7L3BQ96GX2 97 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 ZFATQ9P243 1243 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 AFF4Q9UHB7 1163 aaKnown RBP14.76□□□□□ -0.05
COL4A3-202ENST00000396578 SESN1Q9Y6P5 492 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 LAMC1P11047 1609 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 WDR62O43379 1518 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 AP3B1O00203 1094 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 AP3B2Q13367 1082 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 RINLQ6ZS11 566 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 UNC45AQ9H3U1 944 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 PRKAG2Q9UGJ0 569 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 TSR3Q9UJK0 312 aaKnown RBP14.76□□□□□ -0.05
COL4A3-202ENST00000396578 PITPNM2Q9BZ72 1349 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 NLRP11P59045 1033 aaKnown RBP14.76□□□□□ -0.05
COL4A3-202ENST00000396578 TNIP2Q8NFZ5 429 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 BCS1LQ9Y276 419 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 CFAP74Q9C0B2 1584 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 C5orf58C9J3I9 102 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 NCK2O43639 380 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 BCAR1P56945 870 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 RC3H1Q5TC82 1133 aaKnown RBP14.76□□□□□ -0.05
COL4A3-202ENST00000396578 TRABDQ9H4I3 376 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 PBRM1Q86U86 1689 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 WASHC5Q12768 1159 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 MTMR1Q13613 665 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 KNOP1Q1ED39 458 aaKnown RBP14.76□□□□□ -0.05
COL4A3-202ENST00000396578 SPDYAQ5MJ70 313 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 HORMAD1Q86X24 394 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 PUS7LQ9H0K6 701 aaKnown RBP14.76□□□□□ -0.05
COL4A3-202ENST00000396578 CCND1P24385 295 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 NME3Q13232 169 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 ZNF568Q3ZCX4 644 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 ENOSF1Q7L5Y1 443 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 SRLQ86TD4 932 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 ASIC4Q96FT7 647 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 TRIM62Q9BVG3 475 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 USP15Q9Y4E8 981 aaPredicted RBP14.75□□□□□ -0.05
COL4A3-202ENST00000396578 CC2D2BQ6DHV5 1058 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 CENPPQ6IPU0 288 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 EEPD1Q7L9B9 569 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 BEST2Q8NFU1 509 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 ZNF473Q8WTR7 871 aaKnown RBP14.75□□□□□ -0.05
COL4A3-202ENST00000396578 ANTXR1Q9H6X2 564 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 NSMCE4AQ9NXX6 385 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.75□□□□□ -0.05
COL4A3-202ENST00000396578 USP17L3A6NCW0 530 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 USP17L4A6NCW7 530 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 ENO4A6NNW6 628 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 HMOX2P30519 316 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 USP17L1Q7RTZ2 530 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 KIRREL3Q8IZU9 778 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 PCYOX1LQ8NBM8 494 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 PCSK1NQ9UHG2 260 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 FARP1Q9Y4F1 1045 aaPredicted RBP14.75□□□□□ -0.05
COL4A3-202ENST00000396578 M0R3G1 203 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 APBA3O96018 575 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 COASYQ13057 564 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 DRAP1Q14919 205 aaPredicted RBP14.75□□□□□ -0.05
COL4A3-202ENST00000396578 FAM83BQ5T0W9 1011 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 RAD54LQ92698 747 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 AGBL1Q96MI9 1066 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 PRPF18Q99633 342 aaKnown RBP14.75□□□□□ -0.05
COL4A3-202ENST00000396578 STK36Q9NRP7 1315 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 ATP7AQ04656 1500 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 RPAP1Q9BWH6 1393 aaPredicted RBP14.75□□□□□ -0.05
COL4A3-202ENST00000396578 M0QYV0 167 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 AGTP01019 485 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 CLK1P49759 484 aaKnown RBP14.75□□□□□ -0.05
COL4A3-202ENST00000396578 PRELPP51888 382 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 CNBD2Q96M20 576 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 C11orf70Q9BRQ4 267 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 GNAT1P11488 350 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 PHKA2P46019 1235 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 BYSLQ13895 437 aaKnown RBP14.75□□□□□ -0.05
COL4A3-202ENST00000396578 AASDHQ4L235 1098 aaPredicted RBP14.75□□□□□ -0.05
COL4A3-202ENST00000396578 PGBD4Q96DM1 585 aa14.75□□□□□ -0.05
COL4A3-202ENST00000396578 PUS3Q9BZE2 481 aaKnown RBP14.75□□□□□ -0.05
COL4A3-202ENST00000396578 KCNQ3O43525 872 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 TLR2O60603 784 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 THEMIS2Q5TEJ8 643 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 TTC39CQ8N584 583 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 CYFIP2Q96F07 1278 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 KCNK16Q96T55 309 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 USP17L8P0C7I0 530 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 TCF3P15923 654 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 FBXW10Q5XX13 1052 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 TAS2R42Q7RTR8 314 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 TMC4Q7Z404 712 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 SCN4BQ8IWT1 228 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 IL17REQ8NFR9 667 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 CATSPER4Q7RTX7 472 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 HDDC2Q7Z4H3 204 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 TUBGCP3Q96CW5 907 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 MRPS26Q9BYN8 205 aaKnown RBP14.74□□□□□ -0.05
COL4A3-202ENST00000396578 USE1Q9NZ43 259 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 SPDYE5A6NIY4 337 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 GOLGA8TH3BQL2 631 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 DFFAO00273 331 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 CDC27P30260 824 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 SPDYE7PQ495Y7 208 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms