RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 DNAJC3Q13217 504 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 DHX34Q14147 1143 aaKnown RBP10.55□□□□□ -0.72
TRIM39-203ENST00000396547 SEPT2Q15019 361 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 USH1GQ495M9 461 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 CBWD6Q4V339 395 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 CBWD3Q5JTY5 395 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 CBWD5Q5RIA9 395 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 DPY19L2P1Q6NXN4 242 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 RPGRQ92834 1020 aaKnown RBP10.55□□□□□ -0.72
TRIM39-203ENST00000396547 C9orf72Q96LT7 481 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 NUDCD1Q96RS6 583 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 UBE2TQ9NPD8 197 aaPredicted RBP10.55□□□□□ -0.72
TRIM39-203ENST00000396547 CPSF2Q9P2I0 782 aaKnown RBP10.55□□□□□ -0.72
TRIM39-203ENST00000396547 SCN4AP35499 1836 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 KDM3AQ9Y4C1 1321 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 SPDYE5A6NIY4 337 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 H0YIN7 160 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 VCAM1P19320 739 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 TMED2Q15363 201 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 DALRD3Q5D0E6 543 aaKnown RBP10.55□□□□□ -0.72
TRIM39-203ENST00000396547 ZFATQ9P243 1243 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 SH3BP1Q9Y3L3 701 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 ADAMTSL1Q8N6G6 1762 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 WDR91A4D1P6 747 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 BHMG1C9JSJ3 638 aaPredicted RBP10.54□□□□□ -0.72
TRIM39-203ENST00000396547 FAM13AO94988 1023 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 LINGO3P0C6S8 592 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 CHRNA3P32297 505 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 GBP1P32455 592 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 ZNF76P36508 570 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 SLC12A3P55017 1021 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 MARSP56192 900 aaKnown RBP10.54□□□□□ -0.72
TRIM39-203ENST00000396547 PPATQ06203 517 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 MGAT5Q09328 741 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 SLMAPQ14BN4 828 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 VSTM1Q6UX27 236 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 RFX8Q6ZV50 586 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 ECHDC2Q86YB7 292 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 TPH2Q8IWU9 490 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 SYCP3Q8IZU3 236 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 TTC8Q8TAM2 541 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 TSC22D3Q99576 134 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 HEMGNQ9BXL5 484 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 PIDD1Q9HB75 910 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 KCNMB3Q9NPA1 279 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 MTUS1Q9ULD2 1270 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 RARGP13631 454 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 COILP38432 576 aaPredicted RBP10.54□□□□□ -0.72
TRIM39-203ENST00000396547 SSR1P43307 286 aaKnown RBP10.54□□□□□ -0.72
TRIM39-203ENST00000396547 TUBP50607 506 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 ZNF131P52739 623 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 POLE2P56282 527 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 SETDB1Q15047 1291 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 MYLK2Q9H1R3 596 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 RIOX1Q9H6W3 641 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 RXFP1Q9HBX9 757 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 METTL14Q9HCE5 456 aaKnown RBP10.54□□□□□ -0.72
TRIM39-203ENST00000396547 SLCO1B3Q9NPD5 702 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 ARHGEF3Q9NR81 526 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 INTUQ9ULD6 942 aa10.54□□□□□ -0.72
TRIM39-203ENST00000396547 PASKQ96RG2 1323 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 A0A0A6YYK5 440 aaPredicted RBP10.53□□□□□ -0.72
TRIM39-203ENST00000396547 POC1B-GALNT4F8VUJ3 575 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 PODXLO00592 558 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 ENTPD5O75356 428 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 CBX6O95503 412 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 CALCAP01258 141 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 LDHCP07864 332 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 GNAT1P11488 350 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 ATP4AP20648 1035 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 ALDH1B1P30837 517 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 ADCY8P40145 1251 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 JAM2P57087 298 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 KRT17Q04695 432 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 CCDC6Q16204 474 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 ZFYVE27Q5T4F4 411 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 PPP4R3CPQ6ZMV5 832 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 RNF207Q6ZRF8 634 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 RPUSD2Q8IZ73 545 aaKnown RBP10.53□□□□□ -0.72
TRIM39-203ENST00000396547 TTLL6Q8N841 843 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 CYP2W1Q8TAV3 490 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 SH3GL3Q99963 347 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 RTFDC1Q9BY42 306 aaPredicted RBP10.53□□□□□ -0.72
TRIM39-203ENST00000396547 STK33Q9BYT3 514 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 INTS2Q9H0H0 1204 aaKnown RBP10.53□□□□□ -0.72
TRIM39-203ENST00000396547 METTL5Q9NRN9 209 aaKnown RBP10.53□□□□□ -0.72
TRIM39-203ENST00000396547 PCDHA1Q9Y5I3 950 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 ASTN1O14525 1302 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 PNMA6FA0A0J9YX94 578 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 PDXKO00764 312 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 EXOC3O60645 756 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 ECEL1O95672 775 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 EPHB2P29323 1055 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 PSMC2P35998 433 aaKnown RBP10.53□□□□□ -0.72
TRIM39-203ENST00000396547 FMO5P49326 533 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 BLMHQ13867 455 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 ARMC3Q5W041 872 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 CDCA2Q69YH5 1023 aaPredicted RBP10.53□□□□□ -0.72
TRIM39-203ENST00000396547 SLC30A5Q8TAD4 765 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 TBC1D16Q8TBP0 767 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms