RNA–Protein interactions for RNA: ENST00000396076.5

LDHB-203, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LDHB, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-203ENST00000396076 SNX17Q15036 470 aa25.52■■□□□ 1.68
LDHB-203ENST00000396076 EEF1DP3Q658K8 133 aa25.52■■□□□ 1.68
LDHB-203ENST00000396076 CRELD2Q6UXH1 353 aaPredicted RBP25.52■■□□□ 1.68
LDHB-203ENST00000396076 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.52■■□□□ 1.682e-9■□□□□ 11.3
LDHB-203ENST00000396076 TRIP12Q14669 1992 aaPredicted RBP25.51■■□□□ 1.67
LDHB-203ENST00000396076 FGFR4P22455 802 aa25.51■■□□□ 1.67
LDHB-203ENST00000396076 ACOT2P49753 483 aa25.51■■□□□ 1.67
LDHB-203ENST00000396076 CYP24A1Q07973 514 aa25.51■■□□□ 1.67
LDHB-203ENST00000396076 PLEKHO2Q8TD55 490 aa25.51■■□□□ 1.67
LDHB-203ENST00000396076 ZNF333Q96JL9 665 aa25.51■■□□□ 1.67
LDHB-203ENST00000396076 TRMT13Q9NUP7 481 aaKnown RBP25.51■■□□□ 1.67
LDHB-203ENST00000396076 SIK3Q9Y2K2 1263 aa25.51■■□□□ 1.67
LDHB-203ENST00000396076 FAM189A1O60320 539 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 TRIM49P0CI25 452 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 TRIM49CP0CI26 452 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 HARSP12081 509 aaKnown RBP25.5■■□□□ 1.67
LDHB-203ENST00000396076 GSDMDP57764 484 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 DLG4P78352 724 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 ENPEPQ07075 957 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 PTK7Q13308 1070 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 NOLC1Q14978 699 aaKnown RBP eCLIP25.5■■□□□ 1.671e-7■■■■■ 32.7
LDHB-203ENST00000396076 ZNF568Q3ZCX4 644 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 ZBTB41Q5SVQ8 909 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 CATSPER4Q7RTX7 472 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 CDR2LQ86X02 465 aaPredicted RBP25.5■■□□□ 1.67
LDHB-203ENST00000396076 TMC2Q8TDI7 906 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 TMEM40Q8WWA1 233 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 TRIM44Q96DX7 344 aaPredicted RBP25.5■■□□□ 1.67
LDHB-203ENST00000396076 CPB2Q96IY4 423 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 PDZD7Q9H5P4 517 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 NOD1Q9Y239 953 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 FRMPD3Q5JV73 1810 aa25.5■■□□□ 1.67
LDHB-203ENST00000396076 A0A1B0GUA9 196 aa25.49■■□□□ 1.67
LDHB-203ENST00000396076 M0QZ92 97 aa25.49■■□□□ 1.67
LDHB-203ENST00000396076 ARVCFO00192 962 aa25.49■■□□□ 1.67
LDHB-203ENST00000396076 OGTO15294 1046 aa25.49■■□□□ 1.67
LDHB-203ENST00000396076 KLK7P49862 253 aa25.49■■□□□ 1.67
LDHB-203ENST00000396076 NCBP1Q09161 790 aaKnown RBP25.49■■□□□ 1.67
LDHB-203ENST00000396076 KCNMA1Q12791 1236 aa25.49■■□□□ 1.67
LDHB-203ENST00000396076 C1orf220Q5T0J3 134 aa25.49■■□□□ 1.67
LDHB-203ENST00000396076 PPFIBP1Q86W92 1011 aa25.49■■□□□ 1.67
LDHB-203ENST00000396076 PARD3BQ8TEW8 1205 aa25.49■■□□□ 1.67
LDHB-203ENST00000396076 ARMC5Q96C12 935 aa25.49■■□□□ 1.67
LDHB-203ENST00000396076 PCMTD1Q96MG8 357 aaPredicted RBP25.49■■□□□ 1.67
LDHB-203ENST00000396076 TRPV2Q9Y5S1 764 aa25.49■■□□□ 1.67
LDHB-203ENST00000396076 CDY2AQ9Y6F7 541 aa25.49■■□□□ 1.67
LDHB-203ENST00000396076 SFPQP23246 707 aaKnown RBP eCLIP25.48■■□□□ 1.67
LDHB-203ENST00000396076 FMO5P49326 533 aa25.48■■□□□ 1.67
LDHB-203ENST00000396076 HS1BP3Q53T59 392 aa25.48■■□□□ 1.67
LDHB-203ENST00000396076 CCDC127Q96BQ5 260 aa25.48■■□□□ 1.67
LDHB-203ENST00000396076 SEZ6LQ9BYH1 1024 aa25.48■■□□□ 1.67
LDHB-203ENST00000396076 CDT1Q9H211 546 aa25.48■■□□□ 1.67
LDHB-203ENST00000396076 MCF2P10911 925 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 HOXA11P31270 313 aaPredicted RBP25.47■■□□□ 1.67
LDHB-203ENST00000396076 THPOP40225 353 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 RBL2Q08999 1139 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 TRIM14Q14142 442 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 ARID5BQ14865 1188 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 SEZ6Q53EL9 994 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 USP37Q86T82 979 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 NUP58Q9BVL2 599 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 CRISPLD2Q9H0B8 497 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 GTPBP10A4D1E9 387 aaKnown RBP25.47■■□□□ 1.67
LDHB-203ENST00000396076 CHRNA1P02708 482 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 GYPCP04921 128 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 PPP3CAQ08209 521 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 MGAT3Q09327 533 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 PSMD6Q15008 389 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 TRIM71Q2Q1W2 868 aaKnown RBP25.47■■□□□ 1.67
LDHB-203ENST00000396076 DHX38Q92620 1227 aaKnown RBP25.47■■□□□ 1.67
LDHB-203ENST00000396076 CRACR2AQ9BSW2 395 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 SENP6Q9GZR1 1112 aaPredicted RBP25.47■■□□□ 1.67
LDHB-203ENST00000396076 TRPV6Q9H1D0 765 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 MMRN2Q9H8L6 949 aa25.47■■□□□ 1.67
LDHB-203ENST00000396076 RBAKQ9NYW8 714 aaPredicted RBP25.47■■□□□ 1.67
LDHB-203ENST00000396076 CPSF3Q9UKF6 684 aaKnown RBP25.47■■□□□ 1.67
LDHB-203ENST00000396076 LRRIQ3A6PVS8 624 aaPredicted RBP25.46■■□□□ 1.67
LDHB-203ENST00000396076 STX10O60499 249 aa25.46■■□□□ 1.67
LDHB-203ENST00000396076 B4GALT4O60513 344 aa25.46■■□□□ 1.67
LDHB-203ENST00000396076 SGPL1O95470 568 aa25.46■■□□□ 1.67
LDHB-203ENST00000396076 CTSHP09668 335 aa25.46■■□□□ 1.67
LDHB-203ENST00000396076 AXLP30530 894 aa25.46■■□□□ 1.67
LDHB-203ENST00000396076 TNFSF9P41273 254 aa25.46■■□□□ 1.67
LDHB-203ENST00000396076 CDK7P50613 346 aa25.46■■□□□ 1.67
LDHB-203ENST00000396076 CBWD6Q4V339 395 aa25.46■■□□□ 1.67
LDHB-203ENST00000396076 CBWD3Q5JTY5 395 aa25.46■■□□□ 1.67
LDHB-203ENST00000396076 CBWD5Q5RIA9 395 aa25.46■■□□□ 1.67
LDHB-203ENST00000396076 THNSL1Q8IYQ7 743 aa25.46■■□□□ 1.67
LDHB-203ENST00000396076 CCDC150Q8NCX0 1101 aa25.46■■□□□ 1.67
LDHB-203ENST00000396076 CPLX3Q8WVH0 158 aa25.46■■□□□ 1.67
LDHB-203ENST00000396076 CASP14P31944 242 aa25.45■■□□□ 1.66
LDHB-203ENST00000396076 FIGNQ5HY92 759 aa25.45■■□□□ 1.66
LDHB-203ENST00000396076 GBP6Q6ZN66 633 aa25.45■■□□□ 1.66
LDHB-203ENST00000396076 BRSK2Q8IWQ3 736 aa25.45■■□□□ 1.66
LDHB-203ENST00000396076 U2AF1L4Q8WU68 220 aaKnown RBP25.45■■□□□ 1.66
LDHB-203ENST00000396076 CACTINQ8WUQ7 758 aaKnown RBP25.45■■□□□ 1.66
LDHB-203ENST00000396076 POP1Q99575 1024 aaKnown RBP25.45■■□□□ 1.66
LDHB-203ENST00000396076 ADPGKQ9BRR6 497 aa25.45■■□□□ 1.66
LDHB-203ENST00000396076 AGPAT5Q9NUQ2 364 aa25.45■■□□□ 1.66
LDHB-203ENST00000396076 NOC2LQ9Y3T9 749 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms