RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 ANKLE1Q8NAG6 615 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 MSTO1Q9BUK6 570 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 TRPV6Q9H1D0 765 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 ANKFY1Q9P2R3 1169 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 GINS2Q9Y248 185 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTPN20-206ENST00000395722 A0A1W2PQC6 194 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 ERLIN2O94905 339 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 SFPQP23246 707 aaKnown RBP eCLIP16.47■□□□□ 0.23
PTPN20-206ENST00000395722 BFSP1Q12934 665 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 NOLC1Q14978 699 aaKnown RBP eCLIP16.47■□□□□ 0.23
PTPN20-206ENST00000395722 FAM126BQ8IXS8 530 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 PLEKHO2Q8TD55 490 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 CDT1Q9H211 546 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 M0QZ92 97 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 OGTO15294 1046 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 CD4P01730 458 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 TFRCP02786 760 aaKnown RBP16.47■□□□□ 0.23
PTPN20-206ENST00000395722 MCF2P10911 925 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 FGFR4P22455 802 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 CYP24A1Q07973 514 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 C1orf220Q5T0J3 134 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 CATSPER4Q7RTX7 472 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 TMC2Q8TDI7 906 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 ERGIC2Q96RQ1 377 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 AGPAT5Q9NUQ2 364 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 NOD1Q9Y239 953 aa16.47■□□□□ 0.23
PTPN20-206ENST00000395722 ZNF233A6NK53 670 aa16.46■□□□□ 0.23
PTPN20-206ENST00000395722 AXLP30530 894 aa16.46■□□□□ 0.23
PTPN20-206ENST00000395722 THPOP40225 353 aa16.46■□□□□ 0.23
PTPN20-206ENST00000395722 UBXN1Q04323 297 aa16.46■□□□□ 0.23
PTPN20-206ENST00000395722 KCNH2Q12809 1159 aa16.46■□□□□ 0.23
PTPN20-206ENST00000395722 ZNF568Q3ZCX4 644 aa16.46■□□□□ 0.23
PTPN20-206ENST00000395722 ZBTB41Q5SVQ8 909 aa16.46■□□□□ 0.23
PTPN20-206ENST00000395722 TRAF7Q6Q0C0 670 aa16.46■□□□□ 0.23
PTPN20-206ENST00000395722 ITIH6Q6UXX5 1313 aa16.46■□□□□ 0.23
PTPN20-206ENST00000395722 FAM228AQ86W67 206 aa16.46■□□□□ 0.23
PTPN20-206ENST00000395722 RDH13Q8NBN7 331 aa16.46■□□□□ 0.23
PTPN20-206ENST00000395722 CPB2Q96IY4 423 aa16.46■□□□□ 0.23
PTPN20-206ENST00000395722 FAM213AQ9BRX8 229 aa16.46■□□□□ 0.23
PTPN20-206ENST00000395722 NOC2LQ9Y3T9 749 aaKnown RBP16.46■□□□□ 0.23
PTPN20-206ENST00000395722 AFPP02771 609 aaKnown RBP16.46■□□□□ 0.22
PTPN20-206ENST00000395722 KRT13P13646 458 aa16.46■□□□□ 0.22
PTPN20-206ENST00000395722 VAMP7P51809 220 aa16.46■□□□□ 0.22
PTPN20-206ENST00000395722 C1orf53Q5VUE5 145 aa16.46■□□□□ 0.22
PTPN20-206ENST00000395722 TCHPQ9BT92 498 aa16.46■□□□□ 0.22
PTPN20-206ENST00000395722 CPSF3Q9UKF6 684 aaKnown RBP16.46■□□□□ 0.22
PTPN20-206ENST00000395722 SQORQ9Y6N5 450 aa16.46■□□□□ 0.22
PTPN20-206ENST00000395722 CTSHP09668 335 aa16.45■□□□□ 0.22
PTPN20-206ENST00000395722 MATR3P43243 847 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPN20-206ENST00000395722 CLDN10P78369 228 aa16.45■□□□□ 0.22
PTPN20-206ENST00000395722 POU5F1Q01860 360 aaKnown RBP16.45■□□□□ 0.22
PTPN20-206ENST00000395722 PSMD6Q15008 389 aa16.45■□□□□ 0.22
PTPN20-206ENST00000395722 FKBP15Q5T1M5 1219 aa16.45■□□□□ 0.22
PTPN20-206ENST00000395722 SPECC1LQ69YQ0 1117 aa16.45■□□□□ 0.22
PTPN20-206ENST00000395722 ANKRD33Q7Z3H0 272 aa16.45■□□□□ 0.22
PTPN20-206ENST00000395722 ZBTB33Q86T24 672 aa16.45■□□□□ 0.22
PTPN20-206ENST00000395722 CDR2LQ86X02 465 aaPredicted RBP16.45■□□□□ 0.22
PTPN20-206ENST00000395722 PARD3BQ8TEW8 1205 aa16.45■□□□□ 0.22
PTPN20-206ENST00000395722 MROH7Q68CQ1 1323 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 CKBP12277 381 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 ACOT2P49753 483 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 NCBP1Q09161 790 aaKnown RBP16.44■□□□□ 0.22
PTPN20-206ENST00000395722 TBX2Q13207 712 aaPredicted RBP16.44■□□□□ 0.22
PTPN20-206ENST00000395722 PTPN21Q16825 1174 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 TMEM132AQ24JP5 1023 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 DCAF17Q5H9S7 520 aaPredicted RBP16.44■□□□□ 0.22
PTPN20-206ENST00000395722 FBXO47Q5MNV8 452 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 NOTUMQ6P988 496 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 SLC39A5Q6ZMH5 540 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 TMC6Q7Z403 805 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 BRSK2Q8IWQ3 736 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 CAGE1Q8TC20 777 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 CCDC51Q96ER9 411 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 MCOLN1Q9GZU1 580 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 IMPACTQ9P2X3 320 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 SIK3Q9Y2K2 1263 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 GTPBP10A4D1E9 387 aaKnown RBP16.44■□□□□ 0.22
PTPN20-206ENST00000395722 PMM2O15305 246 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 TRIM49P0CI25 452 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 TRIM49CP0CI26 452 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 DLG4P78352 724 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 KYAT1Q16773 422 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 DCAF4L1Q3SXM0 396 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 ZNF618Q5T7W0 954 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 SPC24Q8NBT2 197 aa16.44■□□□□ 0.22
PTPN20-206ENST00000395722 DIS3LQ8TF46 1054 aaKnown RBP16.44■□□□□ 0.22
PTPN20-206ENST00000395722 LRRIQ3A6PVS8 624 aaPredicted RBP16.43■□□□□ 0.22
PTPN20-206ENST00000395722 PES1O00541 588 aaKnown RBP16.43■□□□□ 0.22
PTPN20-206ENST00000395722 HARSP12081 509 aaKnown RBP16.43■□□□□ 0.22
PTPN20-206ENST00000395722 TNFSF9P41273 254 aa16.43■□□□□ 0.22
PTPN20-206ENST00000395722 FMO5P49326 533 aa16.43■□□□□ 0.22
PTPN20-206ENST00000395722 WNT7BP56706 349 aa16.43■□□□□ 0.22
PTPN20-206ENST00000395722 SYCP1Q15431 976 aa16.43■□□□□ 0.22
PTPN20-206ENST00000395722 TCERG1LQ5VWI1 586 aa16.43■□□□□ 0.22
PTPN20-206ENST00000395722 SLC27A1Q6PCB7 646 aa16.43■□□□□ 0.22
PTPN20-206ENST00000395722 DRC7Q8IY82 874 aa16.43■□□□□ 0.22
PTPN20-206ENST00000395722 TOX2Q96NM4 488 aa16.43■□□□□ 0.22
PTPN20-206ENST00000395722 ERVK-5Q9HDB9 667 aa16.43■□□□□ 0.22
PTPN20-206ENST00000395722 RBAKQ9NYW8 714 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms