RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 NOP9Q86U38 636 aaKnown RBP16.54■□□□□ 0.24
UBE2D3-207ENST00000394801 PPM1KQ8N3J5 372 aa16.54■□□□□ 0.24
UBE2D3-207ENST00000394801 FBXL13Q8NEE6 735 aa16.54■□□□□ 0.24
UBE2D3-207ENST00000394801 SEC14L1Q92503 715 aa16.54■□□□□ 0.24
UBE2D3-207ENST00000394801 CCDC127Q96BQ5 260 aa16.54■□□□□ 0.24
UBE2D3-207ENST00000394801 PCDHB18PQ96TA0 734 aa16.54■□□□□ 0.24
UBE2D3-207ENST00000394801 ATP6V0A4Q9HBG4 840 aa16.54■□□□□ 0.24
UBE2D3-207ENST00000394801 RAB20Q9NX57 234 aa16.54■□□□□ 0.24
UBE2D3-207ENST00000394801 GPRC5DQ9NZD1 345 aa16.54■□□□□ 0.24
UBE2D3-207ENST00000394801 FEZ2Q9UHY8 353 aaPredicted RBP16.54■□□□□ 0.24
UBE2D3-207ENST00000394801 SSC5DA1L4H1 1573 aa16.54■□□□□ 0.24
UBE2D3-207ENST00000394801 LOC285556D6RIA3 1793 aa16.54■□□□□ 0.24
UBE2D3-207ENST00000394801 ATG7O95352 703 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 ECHS1P30084 290 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 POU5F1Q01860 360 aaKnown RBP16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 ZSCAN26Q16670 478 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 DCAF12L1Q5VU92 463 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 MIS18BP1Q6P0N0 1132 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 TAS1R3Q7RTX0 852 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 MAATS1Q7Z4T9 603 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 CD302Q8IX05 232 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 GPD1LQ8N335 351 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 DNERQ8NFT8 737 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 POMGNT1Q8WZA1 660 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 DDX47Q9H0S4 455 aaKnown RBP16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 PLEKHA4Q9H4M7 779 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 ALG6Q9Y672 507 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 GOLGA6CA6NDK9 693 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 SUPT20HL2P0C7V6 817 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 GOLGA6DP0CG33 693 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 ITGA4P13612 1032 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 SP2Q02086 613 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 CLUL1Q15846 466 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 PPP2R5EQ16537 467 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 SUPT20HL1Q3ZLR7 823 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 SV2AQ7L0J3 742 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 CHST13Q8NET6 341 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.53■□□□□ 0.245e-17■□□□□ 9.4
UBE2D3-207ENST00000394801 CCDC26Q8TAB7 109 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 FAM76AQ8TAV0 307 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 IFT74Q96LB3 600 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 ZIM3Q96PE6 472 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 POP1Q99575 1024 aaKnown RBP16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 GOLGA6AQ9NYA3 693 aa16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 CWC15Q9P013 229 aaKnown RBP16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 SEPT9Q9UHD8 586 aaPredicted RBP16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 MAFBQ9Y5Q3 323 aaPredicted RBP16.53■□□□□ 0.24
UBE2D3-207ENST00000394801 MIF4GDA9UHW6 222 aaKnown RBP16.52■□□□□ 0.24
UBE2D3-207ENST00000394801 CYP26A1O43174 497 aa16.52■□□□□ 0.24
UBE2D3-207ENST00000394801 FGGP02679 453 aa16.52■□□□□ 0.24
UBE2D3-207ENST00000394801 SCP2P22307 547 aa16.52■□□□□ 0.24
UBE2D3-207ENST00000394801 HSPA9P38646 679 aaKnown RBP16.52■□□□□ 0.24
UBE2D3-207ENST00000394801 TAS1R2Q8TE23 839 aa16.52■□□□□ 0.24
UBE2D3-207ENST00000394801 PIK3R5Q8WYR1 880 aa16.52■□□□□ 0.24
UBE2D3-207ENST00000394801 NT5C1BQ96P26 610 aa16.52■□□□□ 0.24
UBE2D3-207ENST00000394801 RPS6KC1Q96S38 1066 aa16.52■□□□□ 0.24
UBE2D3-207ENST00000394801 NAP1L3Q99457 506 aaPredicted RBP16.52■□□□□ 0.24
UBE2D3-207ENST00000394801 GGA3Q9NZ52 723 aa16.52■□□□□ 0.24
UBE2D3-207ENST00000394801 DOCK5Q9H7D0 1870 aa16.52■□□□□ 0.24
UBE2D3-207ENST00000394801 LCTP09848 1927 aa16.52■□□□□ 0.24
UBE2D3-207ENST00000394801 HNRNPDLO14979 420 aaKnown RBP16.52■□□□□ 0.23
UBE2D3-207ENST00000394801 USP8P40818 1118 aa16.52■□□□□ 0.23
UBE2D3-207ENST00000394801 CLDN10P78369 228 aa16.52■□□□□ 0.23
UBE2D3-207ENST00000394801 FMO1Q01740 532 aa16.52■□□□□ 0.23
UBE2D3-207ENST00000394801 STXBP2Q15833 593 aa16.52■□□□□ 0.23
UBE2D3-207ENST00000394801 SLC47A2Q86VL8 602 aa16.52■□□□□ 0.23
UBE2D3-207ENST00000394801 MORC4Q8TE76 937 aa16.52■□□□□ 0.23
UBE2D3-207ENST00000394801 CTTNBP2NLQ9P2B4 639 aa16.52■□□□□ 0.23
UBE2D3-207ENST00000394801 STYXL1Q9Y6J8 313 aa16.52■□□□□ 0.23
UBE2D3-207ENST00000394801 ZC3H11AO75152 810 aaKnown RBP eCLIP16.51■□□□□ 0.233e-19■□□□□ 8.5
UBE2D3-207ENST00000394801 CYP11B1P15538 503 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 ATP4AP20648 1035 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 HIRAP54198 1017 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 CFAP58Q5T655 872 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 LEKR1Q6ZMV7 388 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 C15orf39Q6ZRI6 1047 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 ENOSF1Q7L5Y1 443 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 CCDC125Q86Z20 511 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 C1orf131Q8NDD1 294 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 RNPC3Q96LT9 517 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 RUFY1Q96T51 708 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 KIAA1586Q9HCI6 787 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 AMACRQ9UHK6 382 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 ZNF233A6NK53 670 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 SHOX2O60902 331 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 USP2O75604 605 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 GUCY2FP51841 1108 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 PTENP60484 403 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 CDR2Q01850 454 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 GCNT1Q02742 428 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 DDX1Q92499 740 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 FAM81BQ96LP2 452 aa16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 POLR3FQ9H1D9 316 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 TOPORSQ9NS56 1045 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-207ENST00000394801 SYNGAP1Q96PV0 1343 aa16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 MYH9P35579 1960 aaKnown RBP16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 CYP1A2P05177 515 aa16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 GPC2Q8N158 579 aa16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 ALG3Q92685 438 aa16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 DHX33Q9H6R0 707 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms