RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 MYPNQ86TC9 1320 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 A0A1B0GTH6 734 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 ATP2A1O14983 1001 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 FBXO24O75426 580 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 CELF2O95319 508 aaKnown RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 EYA4O95677 639 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 CCNE2O96020 404 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 SKILP12757 684 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 SFPQP23246 707 aaKnown RBP eCLIP6.44□□□□□ -1.38
CASC3-202ENST00000394114 HOXA7P31268 230 aaPredicted RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 COPB1P53618 953 aaKnown RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 ADKP55263 362 aaKnown RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 GRM1Q13255 1194 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 MOGSQ13724 837 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 GIT2Q14161 759 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 NR1I3Q14994 352 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 EPHA7Q15375 998 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 UGCGQ16739 394 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 TMEM95Q3KNT9 176 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 TCP11X2Q5H9J9 407 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 UTP14CQ5TAP6 766 aaKnown RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 NXNQ6DKJ4 435 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 RINT1Q6NUQ1 792 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 SEPT14Q6ZU15 432 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 TCEAL8Q8IYN2 117 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 DHTKD1Q96HY7 919 aaPredicted RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 FERD3LQ96RJ6 166 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 ADD3Q9UEY8 706 aaKnown RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 KCNH4Q9UQ05 1017 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 HTTP42858 3142 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 ZNFX1Q9P2E3 1918 aaKnown RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 FRMPD4Q14CM0 1322 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 TBCAO75347 108 aaKnown RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 BCRP11274 1271 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 VARSP26640 1264 aaKnown RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 PBX2P40425 430 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 LONRF2Q1L5Z9 754 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 CEP135Q66GS9 1140 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 GPAT2Q6NUI2 795 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 B3GNT9Q6UX72 402 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 NLRX1Q86UT6 975 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 MYOCDQ8IZQ8 938 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 ANKRD20A12PQ8NF67 263 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 SMCR8Q8TEV9 937 aaPredicted RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 PLD4Q96BZ4 506 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 CNOT6LQ96LI5 555 aaKnown RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 IKZF4Q9H2S9 585 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 TUFT1Q9NNX1 390 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 RBPJLQ9UBG7 517 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 INTUQ9ULD6 942 aa6.44□□□□□ -1.38
CASC3-202ENST00000394114 MYH9P35579 1960 aaKnown RBP6.44□□□□□ -1.38
CASC3-202ENST00000394114 BICDL2A1A5D9 508 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 CNMDO75829 334 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 MYBP10242 640 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 FCGRTP55899 365 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 C1QTNF8P60827 252 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 CCZ1BP86790 482 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 CCZ1P86791 482 aaPredicted RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 UBXN1Q04323 297 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 SNAPC2Q13487 334 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 PIN1Q13526 163 aaPredicted RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 FILIP1LQ4L180 1135 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 DNTTIP2Q5QJE6 756 aaKnown RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 PLA2G4FQ68DD2 849 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 SPECC1LQ69YQ0 1117 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 EP400NLQ6ZTU2 488 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 RIOX2Q8IUF8 465 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 KSR1Q8IVT5 923 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 GUF1Q8N442 669 aaKnown RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 RBBP8NLQ8NC74 664 aaPredicted RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 CHST13Q8NET6 341 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 ATL2Q8NHH9 583 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 KIAA1524Q8TCG1 905 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 SCFD1Q8WVM8 642 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 CCDC43Q96MW1 224 aaKnown RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 INPP4AQ96PE3 977 aaPredicted RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 NACC1Q96RE7 527 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 MRPL44Q9H9J2 332 aaKnown RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 GBA2Q9HCG7 927 aaPredicted RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 TBC1D22BQ9NU19 505 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 KCNMB2Q9Y691 235 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 A0A0G2JMZ2 1700 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 CCL15-CCL14A0A0B4J2E2 113 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 ARHGEF35A5YM69 484 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 B4DLN1 442 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 ZNF500O60304 480 aaPredicted RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 PRPF6O94906 941 aaKnown RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 GCNT3O95395 438 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 TFE3P19532 575 aaPredicted RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 NMT1P30419 496 aaKnown RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 MTIF2P46199 727 aaKnown RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 NPEPPSP55786 919 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 GSDMDP57764 484 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 SP2Q02086 613 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 NOLC1Q14978 699 aaKnown RBP eCLIP6.43□□□□□ -1.382e-7■■■■□ 23.5
CASC3-202ENST00000394114 CCL15Q16663 113 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 INO80DQ53TQ3 878 aaPredicted RBP6.43□□□□□ -1.38
CASC3-202ENST00000394114 IER5Q5VY09 327 aa6.43□□□□□ -1.38
CASC3-202ENST00000394114 CENPPQ6IPU0 288 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms