RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 PAPOLAP51003 745 aaKnown RBP17.51■□□□□ 0.39
PHTF1-205ENST00000393357 ZBTB16Q05516 673 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 MTMR2Q13614 643 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 FRMD5Q7Z6J6 570 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 ARHGEF19Q8IW93 802 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 LZTS2Q9BRK4 669 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 TXLNGYQ9BZA5 131 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 ANAPC5Q9UJX4 755 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 ZNF652Q9Y2D9 606 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 FRMD4BQ9Y2L6 1034 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 SRRM3A6NNA2 597 aaPredicted RBP17.5■□□□□ 0.39
PHTF1-205ENST00000393357 SNUPNO95149 360 aaKnown RBP17.5■□□□□ 0.39
PHTF1-205ENST00000393357 RARGP13631 454 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 CHRNA3P32297 505 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 TAF1BQ53T94 588 aaPredicted RBP17.5■□□□□ 0.39
PHTF1-205ENST00000393357 ODR4Q5SWX8 454 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 ANKLE1Q8NAG6 615 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 DNAJC18Q9H819 358 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 O00370 1275 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 KRT5P13647 590 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 SLC12A3P55017 1021 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 USP4Q13107 963 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 PPP1R15BQ5SWA1 713 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 CCNJLQ8IV13 435 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 SETDB2Q96T68 719 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 ANO3Q9BYT9 981 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 ZNF287Q9HBT7 754 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 ARHGEF3Q9NR81 526 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 RABGAP1Q9Y3P9 1069 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 ALS2Q96Q42 1657 aa17.5■□□□□ 0.39
PHTF1-205ENST00000393357 PI4K2BG5E9Z4 385 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 C6orf229H3BNL8 230 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 GJB6O95452 261 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 TMEM253P0C7T8 217 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 ZSCAN5DPP0CG00 497 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 PSMC2P35998 433 aaKnown RBP17.49■□□□□ 0.39
PHTF1-205ENST00000393357 DHX34Q14147 1143 aaKnown RBP17.49■□□□□ 0.39
PHTF1-205ENST00000393357 HS2ST1Q7LGA3 356 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 MTDHQ86UE4 582 aaKnown RBP17.49■□□□□ 0.39
PHTF1-205ENST00000393357 SLC47A2Q86VL8 602 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 NEDD1Q8NHV4 660 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 TBC1D16Q8TBP0 767 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 DHX38Q92620 1227 aaKnown RBP17.49■□□□□ 0.39
PHTF1-205ENST00000393357 AGPAT1Q99943 283 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 ZSWIM1Q9BR11 485 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 C10orf88Q9H8K7 445 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 PHTF1Q9UMS5 762 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 CASZ1Q86V15 1759 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 GLI3P10071 1580 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 FAM187AA6NFU0 413 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 EML1O00423 815 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 IRF6O14896 467 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 UNC5CO95185 931 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 PPATQ06203 517 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 SLMAPQ14BN4 828 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 DNAJC9Q8WXX5 260 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 DYDC2Q96IM9 177 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 MKNK1Q9BUB5 465 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 DENND2DQ9H6A0 471 aaPredicted RBP17.49■□□□□ 0.39
PHTF1-205ENST00000393357 KCNMB3Q9NPA1 279 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 ZBTB12Q9Y330 459 aaPredicted RBP17.49■□□□□ 0.39
PHTF1-205ENST00000393357 TGFB1I1O43294 461 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 BAG2O95816 211 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 PLCB3Q01970 1234 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 RIPK1Q13546 671 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 RCN1Q15293 331 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 SLC13A5Q86YT5 568 aaPredicted RBP17.49■□□□□ 0.39
PHTF1-205ENST00000393357 ANKMY2Q8IV38 441 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 FAM178BQ8IXR5 827 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 TRIM4Q9C037 500 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 CHKBQ9Y259 395 aa17.49■□□□□ 0.39
PHTF1-205ENST00000393357 R3HDM2Q9Y2K5 976 aaKnown RBP17.49■□□□□ 0.39
PHTF1-205ENST00000393357 EMSYQ7Z589 1322 aa17.48■□□□□ 0.39
PHTF1-205ENST00000393357 EXOC1LA0A1B0GW35 172 aa17.48■□□□□ 0.39
PHTF1-205ENST00000393357 CNGA1P29973 690 aa17.48■□□□□ 0.39
PHTF1-205ENST00000393357 QRICH1Q2TAL8 776 aa17.48■□□□□ 0.39
PHTF1-205ENST00000393357 KHDC1Q4VXA5 237 aaKnown RBP17.48■□□□□ 0.39
PHTF1-205ENST00000393357 PASD1Q8IV76 773 aa17.48■□□□□ 0.39
PHTF1-205ENST00000393357 PHC3Q8NDX5 983 aa17.48■□□□□ 0.39
PHTF1-205ENST00000393357 ZNF564Q8TBZ8 553 aaPredicted RBP17.48■□□□□ 0.39
PHTF1-205ENST00000393357 CORO1CQ9ULV4 474 aaPredicted RBP17.48■□□□□ 0.39
PHTF1-205ENST00000393357 ZBED4O75132 1171 aa17.48■□□□□ 0.39
PHTF1-205ENST00000393357 KRT36O76013 467 aa17.48■□□□□ 0.39
PHTF1-205ENST00000393357 PYGLP06737 847 aa17.48■□□□□ 0.39
PHTF1-205ENST00000393357 ATF2P15336 505 aa17.48■□□□□ 0.39
PHTF1-205ENST00000393357 DSTYKQ6XUX3 929 aa17.48■□□□□ 0.39
PHTF1-205ENST00000393357 CKAP2Q8WWK9 683 aa17.48■□□□□ 0.39
PHTF1-205ENST00000393357 TYW1Q9NV66 732 aaKnown RBP17.48■□□□□ 0.39
PHTF1-205ENST00000393357 KDM3AQ9Y4C1 1321 aa17.48■□□□□ 0.39
PHTF1-205ENST00000393357 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.47■□□□□ 0.39
PHTF1-205ENST00000393357 UFL1O94874 794 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 ETS1P14921 441 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 BRD2P25440 801 aaKnown RBP17.47■□□□□ 0.39
PHTF1-205ENST00000393357 PIK3CAP42336 1068 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 EDRF1Q3B7T1 1238 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 PPP1R18Q6NYC8 613 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 ZNF365Q70YC5 407 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 LRRC8CQ8TDW0 803 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 PCDHB18PQ96TA0 734 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 HERPUD2Q9BSE4 406 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms