RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 FER1L4A9Z1Z3 1794 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 ABCC12Q96J65 1359 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 NRKQ7Z2Y5 1582 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 SLIT1O75093 1534 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 DCDC2CA8MYV0 355 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 I3L4J1 428 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 FBP2O00757 339 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 XPO1O14980 1071 aaKnown RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 FGFR4P22455 802 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 ADORA1P30542 326 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 CCNG1P51959 295 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 EPHB1P54762 984 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TFAP4Q01664 338 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 OCA2Q04671 838 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 DNAJC3Q13217 504 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TUBA3CQ13748 450 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TRAPPC3LQ5T215 181 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 ZNF658Q5TYW1 1059 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 LPCAT2Q7L5N7 544 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 SATL1Q86VE3 508 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 ZFRQ96KR1 1074 aaKnown RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 MKNK2Q9HBH9 465 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 DDX25Q9UHL0 483 aaKnown RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 ANGEL1Q9UNK9 670 aaKnown RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 NOC2LQ9Y3T9 749 aaKnown RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 KDM4FA0A1W2PPD8 638 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TAF4O00268 1085 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TRMUO75648 421 aaKnown RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 PCCAP05165 728 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 KRT8P05787 483 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 MCF2P10911 925 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 NAT2P11245 290 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 DDX5P17844 614 aaKnown RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 MFSD6Q6ZSS7 791 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TTC30AQ86WT1 665 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 CCDC125Q86Z20 511 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 GALNT4Q8N4A0 578 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 NLRP7Q8WX94 980 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 DACT3Q96B18 629 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 NSL1Q96IY1 281 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 NSMCE3Q96MG7 304 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TRIM51Q9BSJ1 452 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 THTPAQ9BU02 230 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 LRMDAQ9H2I8 198 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 RPAP3Q9H6T3 665 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 ZNF229Q9UJW7 825 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 B2RBV5 119 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 POC1B-GALNT4F8VUJ3 575 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 OXSR1O95747 527 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 CHEK2O96017 543 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 SULT2A1Q06520 285 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TRPC3Q13507 836 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 ADRM1Q16186 407 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 LONRF1Q17RB8 773 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TAF1BQ53T94 588 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 PACS1Q6VY07 963 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TMC4Q7Z404 712 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TMC3Q7Z5M5 1100 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 LPIN2Q92539 896 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 DNAJC7Q99615 494 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 ECSITQ9BQ95 431 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TRIM56Q9BRZ2 755 aaKnown RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 DDX56Q9NY93 547 aaKnown RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 AIPL1Q9NZN9 384 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 SEPT10Q9P0V9 454 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 ARPP21Q9UBL0 812 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 HPSEQ9Y251 543 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 PTPN22Q9Y2R2 807 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 AK5Q9Y6K8 562 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 KCNQ2O43526 872 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 CTDNEP1O95476 244 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 SLC1A4P43007 532 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 NCAPD2Q15021 1401 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 PUM3Q15397 648 aaKnown RBP8.09□□□□□ -1.11
VTI1A-201ENST00000393077 UAP1Q16222 522 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-201ENST00000393077 PABPC1LQ4VXU2 614 aaKnown RBP8.09□□□□□ -1.11
VTI1A-201ENST00000393077 EAPPQ56P03 285 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-201ENST00000393077 PCNX4Q63HM2 1172 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 ISLR2Q6UXK2 745 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 C3orf67Q6ZVT6 689 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 UBL4BQ8N7F7 174 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 FLCNQ8NFG4 579 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 EPS8L3Q8TE67 593 aaKnown RBP8.09□□□□□ -1.11
VTI1A-201ENST00000393077 PGM2Q96G03 612 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 PRPF18Q99633 342 aaKnown RBP8.09□□□□□ -1.11
VTI1A-201ENST00000393077 DCUN1D5Q9BTE7 237 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 NUP85Q9BW27 656 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 NPHS2Q9NP85 383 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 ADAMTS1Q9UHI8 967 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 EFR3BQ9Y2G0 817 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 SALL3Q9BXA9 1300 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 TRIM49BA6NDI0 452 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 SNAP23O00161 211 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 TEX28O15482 410 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 H2AFZP0C0S5 128 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 CHN2P52757 468 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 PPP2R5CQ13362 524 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 TRADDQ15628 312 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 ANKRD20A4Q4UJ75 823 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 KHDC1Q4VXA5 237 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms