RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 MEI1Q5TIA1 1274 aa21.71■■□□□ 1.07
PTPN11-202ENST00000392597 FAM53CQ9NYF3 392 aa21.71■■□□□ 1.07
PTPN11-202ENST00000392597 PDE2AO00408 941 aaPredicted RBP21.7■■□□□ 1.06
PTPN11-202ENST00000392597 MFAP3P55082 362 aa21.7■■□□□ 1.06
PTPN11-202ENST00000392597 MKRN3Q13064 507 aaKnown RBP21.7■■□□□ 1.06
PTPN11-202ENST00000392597 WDR78Q5VTH9 848 aa21.7■■□□□ 1.06
PTPN11-202ENST00000392597 IER5Q5VY09 327 aa21.7■■□□□ 1.06
PTPN11-202ENST00000392597 NFRKBQ6P4R8 1299 aa21.7■■□□□ 1.06
PTPN11-202ENST00000392597 GLYCTKQ8IVS8 523 aa21.7■■□□□ 1.06
PTPN11-202ENST00000392597 DHX37Q8IY37 1157 aaKnown RBP21.7■■□□□ 1.06
PTPN11-202ENST00000392597 ATP8B4Q8TF62 1192 aa21.7■■□□□ 1.06
PTPN11-202ENST00000392597 TCP11Q8WWU5 503 aa21.7■■□□□ 1.06
PTPN11-202ENST00000392597 PSPC1Q8WXF1 523 aaKnown RBP21.7■■□□□ 1.06
PTPN11-202ENST00000392597 FAM213AQ9BRX8 229 aa21.7■■□□□ 1.06
PTPN11-202ENST00000392597 TARSL2A2RTX5 802 aaKnown RBP21.69■■□□□ 1.06
PTPN11-202ENST00000392597 ADCY3O60266 1144 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 TNFAIP3P21580 790 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 EFNA5P52803 228 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 TTLL4Q14679 1199 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 PSMD6Q15008 389 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 WDR93Q6P2C0 686 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 PAXIP1Q6ZW49 1069 aaPredicted RBP21.69■■□□□ 1.06
PTPN11-202ENST00000392597 FAM71AQ8IYT1 594 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 COG1Q8WTW3 980 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 LMBR1Q8WVP7 490 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 GLG1Q92896 1179 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 FAM81BQ96LP2 452 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 RAB20Q9NX57 234 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 NCANO14594 1321 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 ZC3H11AO75152 810 aaKnown RBP eCLIP21.69■■□□□ 1.06
PTPN11-202ENST00000392597 LRRN2O75325 713 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 ERLIN1O75477 346 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 LDHAP00338 332 aaKnown RBP21.69■■□□□ 1.06
PTPN11-202ENST00000392597 RHOXF2BP0C7M4 288 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 TMEM253P0C7T8 217 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 CYP2C8P10632 490 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 MCM3P25205 808 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 HSDL1Q3SXM5 330 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 CYP4F22Q6NT55 531 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 FBXO16Q8IX29 292 aaPredicted RBP21.69■■□□□ 1.06
PTPN11-202ENST00000392597 SCFD2Q8WU76 684 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 SHC3Q92529 594 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 SEMA4DQ92854 862 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 PNKPQ96T60 521 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 AGPAT1Q99943 283 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 RHOXF2Q9BQY4 288 aa21.69■■□□□ 1.06
PTPN11-202ENST00000392597 JPH2Q9BR39 696 aaPredicted RBP21.69■■□□□ 1.06
PTPN11-202ENST00000392597 AGO2Q9UKV8 859 aaKnown RBP21.69■■□□□ 1.06
PTPN11-202ENST00000392597 DIS3Q9Y2L1 958 aaKnown RBP21.69■■□□□ 1.06
PTPN11-202ENST00000392597 MANSC4A6NHS7 340 aaPredicted RBP21.68■■□□□ 1.06
PTPN11-202ENST00000392597 PDHXO00330 501 aa21.68■■□□□ 1.06
PTPN11-202ENST00000392597 CES2O00748 559 aa21.68■■□□□ 1.06
PTPN11-202ENST00000392597 NCK2O43639 380 aa21.68■■□□□ 1.06
PTPN11-202ENST00000392597 PAFAH1B1P43034 410 aa21.68■■□□□ 1.06
PTPN11-202ENST00000392597 GCLCP48506 637 aaPredicted RBP21.68■■□□□ 1.06
PTPN11-202ENST00000392597 GALCP54803 685 aa21.68■■□□□ 1.06
PTPN11-202ENST00000392597 CAPSQ13938 189 aa21.68■■□□□ 1.06
PTPN11-202ENST00000392597 SV2AQ7L0J3 742 aa21.68■■□□□ 1.06
PTPN11-202ENST00000392597 ABRAQ8N0Z2 381 aa21.68■■□□□ 1.06
PTPN11-202ENST00000392597 LRRC57Q8N9N7 239 aa21.68■■□□□ 1.06
PTPN11-202ENST00000392597 SPATA33Q96N06 139 aa21.68■■□□□ 1.06
PTPN11-202ENST00000392597 NT5C1BQ96P26 610 aa21.68■■□□□ 1.06
PTPN11-202ENST00000392597 EFCC1Q9HA90 598 aa21.68■■□□□ 1.06
PTPN11-202ENST00000392597 PCNTO95613 3336 aa21.68■■□□□ 1.06
PTPN11-202ENST00000392597 CCL15-CCL14A0A0B4J2E2 113 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 IGKV6-21A0A0C4DH24 114 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 HSPA6P17066 643 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 NOGQ13253 232 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 MXD4Q14582 209 aaPredicted RBP21.67■■□□□ 1.06
PTPN11-202ENST00000392597 CCL15Q16663 113 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 CCDC181Q5TID7 509 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 C15orf39Q6ZRI6 1047 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 ENOSF1Q7L5Y1 443 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 ANKRD23Q86SG2 305 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 MMGT1Q8N4V1 131 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 TPCN2Q8NHX9 752 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 KREMEN1Q96MU8 473 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 POP1Q99575 1024 aaKnown RBP21.67■■□□□ 1.06
PTPN11-202ENST00000392597 SMARCAD1Q9H4L7 1026 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 PLXNA1Q9UIW2 1896 aa21.67■■□□□ 1.06
PTPN11-202ENST00000392597 FTCDO95954 541 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 DLATP10515 647 aaKnown RBP21.66■■□□□ 1.06
PTPN11-202ENST00000392597 TXNP10599 105 aaKnown RBP21.66■■□□□ 1.06
PTPN11-202ENST00000392597 NOP2P46087 812 aaKnown RBP21.66■■□□□ 1.06
PTPN11-202ENST00000392597 CDCA2Q69YH5 1023 aaPredicted RBP21.66■■□□□ 1.06
PTPN11-202ENST00000392597 ZPBP2Q6X784 338 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 SLFN11Q7Z7L1 901 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 SYCE1Q8N0S2 351 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 PPM1KQ8N3J5 372 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 HELQQ8TDG4 1101 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 TAS1R2Q8TE23 839 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 RFFLQ8WZ73 363 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 CALR3Q96L12 384 aaKnown RBP21.66■■□□□ 1.06
PTPN11-202ENST00000392597 CAPNS2Q96L46 248 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 TOPORSQ9NS56 1045 aaPredicted RBP21.66■■□□□ 1.06
PTPN11-202ENST00000392597 MORF4L1Q9UBU8 362 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 PLXNB2O15031 1838 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 A0A0B4J269 797 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 STRNO43815 780 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 INHBEP58166 350 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms