RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 TUFT1Q9NNX1 390 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 RNF146Q9NTX7 359 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 TAS2R14Q9NYV8 317 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 HIP1RO75146 1068 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 ECHS1P30084 290 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 SOX5P35711 763 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 AGBL2Q5U5Z8 902 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 DCAF15Q66K64 600 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 CHADLQ6NUI6 762 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 PADI6Q6TGC4 694 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 PHLDB2Q86SQ0 1253 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 GDAP1Q8TB36 358 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 EPS8L3Q8TE67 593 aaKnown RBP11.66□□□□□ -0.54
BRF1-204ENST00000392557 CLEC4DQ8WXI8 215 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.66□□□□□ -0.543e-6■■■■■ 50.8
BRF1-204ENST00000392557 RFFLQ8WZ73 363 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 SLC35C1Q96A29 364 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 ERP44Q9BS26 406 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 KIAA1683Q9H0B3 1180 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 VPS33BQ9H267 617 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 CNOT10Q9H9A5 744 aaKnown RBP11.66□□□□□ -0.54
BRF1-204ENST00000392557 UBE2TQ9NPD8 197 aaPredicted RBP11.66□□□□□ -0.54
BRF1-204ENST00000392557 ASIC3Q9UHC3 531 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 TBK1Q9UHD2 729 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 PGAP2Q9UHJ9 254 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 SLC12A6Q9UHW9 1150 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 PDXKO00764 312 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 GJC1P36383 396 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 PPP2R5CQ13362 524 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 EPHA7Q15375 998 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 TKFCQ3LXA3 575 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 YTHDF3Q7Z739 585 aaKnown RBP11.65□□□□□ -0.54
BRF1-204ENST00000392557 JAMLQ86YT9 394 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 LRRC34Q8IZ02 419 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 ARHGEF26Q96DR7 871 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 NSRP1Q9H0G5 558 aaKnown RBP11.65□□□□□ -0.54
BRF1-204ENST00000392557 SEMA4AQ9H3S1 761 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 SLC38A10Q9HBR0 1119 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 TPX2Q9ULW0 747 aaKnown RBP11.65□□□□□ -0.54
BRF1-204ENST00000392557 STK24Q9Y6E0 443 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 EIF3BP55884 814 aaKnown RBP11.65□□□□□ -0.54
BRF1-204ENST00000392557 MRPS9P82933 396 aaKnown RBP11.65□□□□□ -0.54
BRF1-204ENST00000392557 MYL7Q01449 175 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 CETN1Q12798 172 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 PLA2G4FQ68DD2 849 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 C1orf186Q6ZWK4 172 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 THOC1Q96FV9 657 aaKnown RBP11.65□□□□□ -0.54
BRF1-204ENST00000392557 ERVK-5Q9HDB9 667 aa11.65□□□□□ -0.54
BRF1-204ENST00000392557 ZNF646O15015 1829 aaPredicted RBP11.65□□□□□ -0.55
BRF1-204ENST00000392557 TISP43B9A030 160 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 RASGRF2O14827 1237 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 ATP9AO75110 1047 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 MRRFQ96E11 262 aaKnown RBP11.64□□□□□ -0.55
BRF1-204ENST00000392557 GPRC5CQ9NQ84 441 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 TMEM59LQ9UK28 342 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 ASTN1O14525 1302 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 H0YGN5 161 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 FTLP02792 175 aaPredicted RBP11.64□□□□□ -0.55
BRF1-204ENST00000392557 RPS12P25398 132 aaKnown RBP11.64□□□□□ -0.55
BRF1-204ENST00000392557 NPEPPSP55786 919 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 ZNF280AP59817 542 aaPredicted RBP11.64□□□□□ -0.55
BRF1-204ENST00000392557 CCDC50Q8IVM0 306 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 ZNF280CQ8ND82 737 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 LNX1Q8TBB1 728 aaPredicted RBP11.64□□□□□ -0.55
BRF1-204ENST00000392557 ALG6Q9Y672 507 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 NFS1Q9Y697 457 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 IGSF9BQ9UPX0 1349 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 GAP43P17677 238 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 ELF1P32519 619 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 BACE1P56817 501 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 MYO1EQ12965 1108 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 XKR9Q5GH70 373 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 CCDC137Q6PK04 289 aaKnown RBP11.64□□□□□ -0.55
BRF1-204ENST00000392557 ARMC9Q7Z3E5 817 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 TATDN2Q93075 761 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 MTUS1Q9ULD2 1270 aa11.64□□□□□ -0.55
BRF1-204ENST00000392557 CCT8L1PA6NM43 557 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 EIF4E1BA6NMX2 242 aaKnown RBP11.63□□□□□ -0.55
BRF1-204ENST00000392557 FMO5P49326 533 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 HSD17B4P51659 736 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 DRP2Q13474 957 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 BYSLQ13895 437 aaKnown RBP11.63□□□□□ -0.55
BRF1-204ENST00000392557 LONRF1Q17RB8 773 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 FAM102BQ5T8I3 360 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 NUGGCQ68CJ6 796 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 PALB2Q86YC2 1186 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 SCYL3Q8IZE3 742 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 PPM1KQ8N3J5 372 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 BTBD6Q96KE9 485 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 FOXN3O00409 490 aaPredicted RBP11.63□□□□□ -0.55
BRF1-204ENST00000392557 VWA5AO00534 786 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 TGFB1I1O43294 461 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 SCP2P22307 547 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 MARCKSL1P49006 195 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 PGM5Q15124 567 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 SLC20A1Q8WUM9 679 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 KRT35Q92764 455 aa11.63□□□□□ -0.55
BRF1-204ENST00000392557 INTS2Q9H0H0 1204 aaKnown RBP11.63□□□□□ -0.55
BRF1-204ENST00000392557 PABPC3Q9H361 631 aaKnown RBP11.63□□□□□ -0.55
BRF1-204ENST00000392557 SUFUQ9UMX1 484 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms