RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 KIFC3Q9BVG8 833 aa13.81□□□□□ -0.2
PCNX4-202ENST00000391611 SLC13A1Q9BZW2 595 aa13.81□□□□□ -0.2
PCNX4-202ENST00000391611 SPATS2LQ9NUQ6 558 aaKnown RBP13.81□□□□□ -0.2
PCNX4-202ENST00000391611 REXO2Q9Y3B8 237 aaKnown RBP13.81□□□□□ -0.2
PCNX4-202ENST00000391611 PFASO15067 1338 aa13.81□□□□□ -0.2
PCNX4-202ENST00000391611 MSH4O15457 936 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 PRPSAP2O60256 369 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 ZBED1O96006 694 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 SLC27A3Q5K4L6 730 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 ZC3H18Q86VM9 953 aaKnown RBP13.8□□□□□ -0.2
PCNX4-202ENST00000391611 DNAAF3Q8N9W5 541 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 ATL2Q8NHH9 583 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 EPS8L3Q8TE67 593 aaKnown RBP13.8□□□□□ -0.2
PCNX4-202ENST00000391611 SPDL1Q96EA4 605 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 HSD3B7Q9H2F3 369 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 FBXO28Q9NVF7 368 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 CCT8L1PA6NM43 557 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 CRCPO75575 148 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 DCTN3O75935 186 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 SYF2O95926 243 aaKnown RBP13.8□□□□□ -0.2
PCNX4-202ENST00000391611 CCND2P30279 289 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 RAD23BP54727 409 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 CCHCR1Q8TD31 782 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 CDKL2Q92772 493 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 AKT3Q9Y243 479 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 USP15Q9Y4E8 981 aaPredicted RBP13.8□□□□□ -0.2
PCNX4-202ENST00000391611 PITPNM2Q9BZ72 1349 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 SLC16A3O15427 465 aaKnown RBP13.8□□□□□ -0.2
PCNX4-202ENST00000391611 SKIP12755 728 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 ERVK-9P63128 1117 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 RNASELQ05823 741 aaKnown RBP13.8□□□□□ -0.2
PCNX4-202ENST00000391611 MEI1Q5TIA1 1274 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 AGBL2Q5U5Z8 902 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 GSDMBQ8TAX9 411 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 RBM41Q96IZ5 413 aaKnown RBP13.8□□□□□ -0.2
PCNX4-202ENST00000391611 CXorf56Q9H5V9 222 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 TBC1D22BQ9NU19 505 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 FIS1Q9Y3D6 152 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 CCDC195A0A1B0GUA6 201 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 COPEO14579 308 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 CFLARO15519 480 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 YWHABP31946 246 aaKnown RBP13.8□□□□□ -0.2
PCNX4-202ENST00000391611 GIT2Q14161 759 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 MEA1Q16626 185 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 RAPH1Q70E73 1250 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 IRF2BP1Q8IU81 584 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 SULF1Q8IWU6 871 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 NUDCD1Q96RS6 583 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 AGPAT3Q9NRZ7 376 aa13.8□□□□□ -0.2
PCNX4-202ENST00000391611 SLURP2P0DP57 97 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 SNRNP35Q16560 246 aaKnown RBP13.79□□□□□ -0.2
PCNX4-202ENST00000391611 MCPH1Q8NEM0 835 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 ZNF507Q8TCN5 953 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 FBXO41Q8TF61 875 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 TTC1Q99614 292 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 MTRQ99707 1265 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 MED10Q9BTT4 135 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 TRABDQ9H4I3 376 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 SMYD3Q9H7B4 428 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 TUFT1Q9NNX1 390 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 RNF146Q9NTX7 359 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 SSX2IPQ9Y2D8 614 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 ARL2BPQ9Y2Y0 163 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 KLRC4O43908 158 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 PSMC5P62195 406 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 P3H1Q32P28 736 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 DTX3LQ8TDB6 740 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 TRIM4Q9C037 500 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 CARD9Q9H257 536 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 PABPC3Q9H361 631 aaKnown RBP13.79□□□□□ -0.2
PCNX4-202ENST00000391611 SCOCQ9UIL1 159 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 CSADQ9Y600 493 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 PIK3R2O00459 728 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 COG2Q14746 738 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 GRIK5Q16478 980 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 FAM160B1Q5W0V3 765 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 AP1ARQ63HQ0 302 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 SP8Q8IXZ3 490 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 PRPF38AQ8NAV1 312 aaKnown RBP13.79□□□□□ -0.2
PCNX4-202ENST00000391611 SEMA4AQ9H3S1 761 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 TMBIM4Q9HC24 238 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 GPRC5CQ9NQ84 441 aa13.79□□□□□ -0.2
PCNX4-202ENST00000391611 IQANK1A0A1B0GTG1 560 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 CDH16O75309 829 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 EPHB1P54762 984 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 MAPK7Q13164 816 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 LRP10Q7Z4F1 713 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 AENQ8WTP8 325 aaKnown RBP13.78□□□□□ -0.2
PCNX4-202ENST00000391611 ERP27Q96DN0 273 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 SGSM3Q96HU1 749 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 NUF2Q9BZD4 464 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
PCNX4-202ENST00000391611 MYO3BQ8WXR4 1341 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 HAUS5O94927 633 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 ITGA8P53708 1063 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 SH2D4BQ5SQS7 431 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 SNRNP48Q6IEG0 339 aaKnown RBP13.78□□□□□ -0.2
PCNX4-202ENST00000391611 CYB5D1Q6P9G0 228 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 RHPN2Q8IUC4 686 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 FLAD1Q8NFF5 587 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms