RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 TSR2Q969E8 191 aaKnown RBP5.74□□□□□ -1.49
SNORA40.2-201ENST00000390847 IL17RAQ96F46 866 aa5.74□□□□□ -1.49
SNORA40.2-201ENST00000390847 PDCD2LQ9BRP1 358 aa5.74□□□□□ -1.49
SNORA40.2-201ENST00000390847 BDH2Q9BUT1 245 aa5.74□□□□□ -1.49
SNORA40.2-201ENST00000390847 SENP6Q9GZR1 1112 aaPredicted RBP5.74□□□□□ -1.49
SNORA40.2-201ENST00000390847 MANSC1Q9H8J5 431 aa5.74□□□□□ -1.49
SNORA40.2-201ENST00000390847 LANCL2Q9NS86 450 aa5.74□□□□□ -1.49
SNORA40.2-201ENST00000390847 PLA2G3Q9NZ20 509 aa5.74□□□□□ -1.49
SNORA40.2-201ENST00000390847 ZFR2Q9UPR6 939 aaKnown RBP5.74□□□□□ -1.49
SNORA40.2-201ENST00000390847 IPPQ9Y573 584 aa5.74□□□□□ -1.49
SNORA40.2-201ENST00000390847 PCDHA13Q9Y5I0 950 aa5.74□□□□□ -1.49
SNORA40.2-201ENST00000390847 GPR42O15529 346 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 OFD1O75665 1012 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 EDNRBP24530 442 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 AKAP5P24588 427 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 MSX2P35548 267 aaPredicted RBP5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 SREBF1P36956 1147 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 GZMKP49863 264 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 APBA1Q02410 837 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 IL10RAQ13651 578 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 FAM214AQ32MH5 1076 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 PRAMEF14Q5SWL7 426 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 ERICH6BQ5W0A0 696 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 TTLL10Q6ZVT0 673 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 RSPH3Q86UC2 560 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 LILRA3Q8N6C8 439 aaPredicted RBP5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 KAT5Q92993 513 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 RAB24Q969Q5 203 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 KRTAP4-12Q9BQ66 201 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 TDP1Q9NUW8 608 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 CHPF2Q9P2E5 772 aa5.73□□□□□ -1.49
SNORA40.2-201ENST00000390847 FOXS1O43638 330 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 AP1G1O43747 822 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 MARCH6O60337 910 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 RAD17O75943 681 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 RPLP2P05387 115 aaKnown RBP5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 U2AF1L5P0DN76 240 aaPredicted RBP5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 HSPA6P17066 643 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 PDCP20941 246 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 SLC6A9P48067 706 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 CTSWP56202 376 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 U2AF1Q01081 240 aaKnown RBP eCLIP5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 FKBP15Q5T1M5 1219 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 FAM102BQ5T8I3 360 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 PPP4R3AQ6IN85 833 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 USP45Q70EL2 814 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 GRAMD1CQ8IYS0 662 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 TRMT2AQ8IZ69 625 aaKnown RBP5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 FUKQ8N0W3 1084 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 MYO1HQ8N1T3 1032 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 D2HGDHQ8N465 521 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 STON2Q8WXE9 905 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 CLIP3Q96DZ5 547 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 ZNF512Q96ME7 567 aaPredicted RBP5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 MAP3K14Q99558 947 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 TMEM140Q9NV12 185 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 AJAP1Q9UKB5 411 aaPredicted RBP5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 HDAC5Q9UQL6 1122 aa5.72□□□□□ -1.49
SNORA40.2-201ENST00000390847 ZMYM3Q14202 1370 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 HOXA3O43365 443 aaPredicted RBP5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 GPR32O75388 356 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 STC2O76061 302 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 ITGB3P05106 788 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 POU2F2P09086 479 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 IL2RBP14784 551 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 SYN1P17600 705 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 GNAT2P19087 354 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 HHEXQ03014 270 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 PLP2Q04941 152 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 DUSP8Q13202 625 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 MRPL49Q13405 166 aaKnown RBP5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 GTF2H3Q13889 308 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 MLC1Q15049 377 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 FBLN7Q53RD9 439 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 MFSD5Q6N075 450 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 CXorf57Q6NSI4 855 aaKnown RBP5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 LILRA6Q6PI73 481 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 DRC7Q8IY82 874 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 CYFIP2Q96F07 1278 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 LOXL4Q96JB6 756 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 TMX3Q96JJ7 454 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 AIFM3Q96NN9 605 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 GTPBP4Q9BZE4 634 aaKnown RBP5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 ENKD1Q9H0I2 346 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 NMRK2Q9NPI5 230 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 SIK3Q9Y2K2 1263 aa5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 CFAP20Q9Y6A4 193 aaKnown RBP5.71□□□□□ -1.5
SNORA40.2-201ENST00000390847 PRPF3O43395 683 aaKnown RBP5.7□□□□□ -1.5
SNORA40.2-201ENST00000390847 RAP2AP10114 183 aa5.7□□□□□ -1.5
SNORA40.2-201ENST00000390847 ATF3P18847 181 aa5.7□□□□□ -1.5
SNORA40.2-201ENST00000390847 CDC42EP1Q00587 391 aa5.7□□□□□ -1.5
SNORA40.2-201ENST00000390847 FOXL1Q12952 345 aa5.7□□□□□ -1.5
SNORA40.2-201ENST00000390847 ZNF267Q14586 743 aaPredicted RBP5.7□□□□□ -1.5
SNORA40.2-201ENST00000390847 ELAVL1Q15717 326 aaKnown RBP5.7□□□□□ -1.5
SNORA40.2-201ENST00000390847 NXNQ6DKJ4 435 aa5.7□□□□□ -1.5
SNORA40.2-201ENST00000390847 POLNQ7Z5Q5 900 aa5.7□□□□□ -1.5
SNORA40.2-201ENST00000390847 TCEAL8Q8IYN2 117 aa5.7□□□□□ -1.5
SNORA40.2-201ENST00000390847 MAGEB6Q8N7X4 407 aa5.7□□□□□ -1.5
SNORA40.2-201ENST00000390847 MVB12AQ96EY5 273 aa5.7□□□□□ -1.5
SNORA40.2-201ENST00000390847 CEP95Q96GE4 821 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms