RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ST13P4Q8IZP2 240 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 DDX27Q96GQ7 796 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 DNAI2Q9GZS0 605 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 CCDC195A0A1B0GUA6 201 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 COPEO14579 308 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 KIF3CO14782 793 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 MCF2LO15068 1137 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 NVLO15381 856 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 SHBGP04278 402 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 NCF2P19878 526 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 SAT1P21673 171 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 ARL4CP56559 192 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 LRRC36Q1X8D7 754 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 TMEM270Q6UE05 265 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 CD302Q8IX05 232 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 MORC4Q8TE76 937 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 CDC42EP4Q9H3Q1 356 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 PI4KBQ9UBF8 816 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 IQANK1A0A1B0GTG1 560 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 F5H6K3 240 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 SPECC1L-ADORA2AF8WAN1 911 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 TLR3O15455 904 aaKnown RBP13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 GHRP10912 638 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 RARGP13631 454 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 RANBP1P43487 201 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 KLRC3Q07444 240 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 TTC25Q96NG3 672 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 LXNQ9BS40 222 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 COMMD10Q9Y6G5 202 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 NWD1Q149M9 1564 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 CASQ2O14958 399 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 PTENP60484 403 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 PDE1CQ14123 709 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 ZSWIM1Q9BR11 485 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 Q9H521 79 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 SEPT9Q9UHD8 586 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 C15orf41Q9Y2V0 281 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 C1orf167Q5SNV9 1468 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 PGM1P36871 562 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 ALDH5A1P51649 535 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 SF3B3Q15393 1217 aaKnown RBP13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 GEN1Q17RS7 908 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 LMBRD2Q68DH5 695 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 MREGQ8N565 214 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 CPA5Q8WXQ8 436 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 INPP4AQ96PE3 977 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 CENPKQ9BS16 269 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 CLRN2A0PK11 232 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 KCNQ2O43526 872 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 ZWINTO95229 277 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 TNFRSF8P28908 595 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 POLGP54098 1239 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 KDSRQ06136 332 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 KRT39Q6A163 491 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 FAM196AQ6ZSG2 479 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 TRIM42Q8IWZ5 723 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 RHOT1Q8IXI2 618 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 TMEM117Q9H0C3 514 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 SEL1LQ9UBV2 794 aa13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 FAF1Q9UNN5 650 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-201ENST00000389328 hCG_2014768A0A024R1R8 64 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 ESYT2A0FGR8 921 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 DDX3XO00571 662 aaKnown RBP eCLIP13.97□□□□□ -0.178e-8■■■■■ 34.7
TRAPPC9-201ENST00000389328 ASAP2O43150 1006 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 EIF2AK2P19525 551 aaKnown RBP13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 FLT3P36888 993 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 FUT2Q10981 343 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 SYCP2LQ5T4T6 812 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 KCTD6Q8NC69 237 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 CCDC124Q96CT7 223 aaKnown RBP13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 NAF1Q96HR8 494 aaKnown RBP13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 FAM213AQ9BRX8 229 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 IRAK4Q9NWZ3 460 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 NXF1Q9UBU9 619 aaKnown RBP13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 GINS2Q9Y248 185 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 PPP1R12AO14974 1030 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 LPXNO60711 386 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 KCNA3P22001 575 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 OVGP1Q12889 678 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 C16orf86Q6ZW13 317 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 NT5DC3Q86UY8 548 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 PPM1NQ8N819 430 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 FAM81BQ96LP2 452 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 SERPINB12Q96P63 405 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 NUF2Q9BZD4 464 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 SLC13A1Q9BZW2 595 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 TMEM191BP0C7N4 346 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 MARK3P27448 753 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 RPA1P27694 616 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 MAGEA4P43358 317 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 SH3BGRP55822 239 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 SCARA5Q6ZMJ2 495 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 LRP10Q7Z4F1 713 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 TXNRD3Q86VQ6 643 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 CRLF3Q8IUI8 442 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 AGAP11Q8TF27 550 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 NEU2Q9Y3R4 380 aa13.97□□□□□ -0.17
TRAPPC9-201ENST00000389328 IPO5O00410 1097 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 CPA2P48052 419 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms