RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 MTMR1Q13613 665 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 PUM1Q14671 1186 aaKnown RBP eCLIP3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 MUM1L1Q5H9M0 696 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 TOR2AQ5JU69 321 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 SYDE2Q5VT97 1194 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 MBNL2Q5VZF2 373 aaKnown RBP3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 METRNLQ641Q3 311 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 FAM180AQ6UWF9 173 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 PDZD4Q76G19 769 aaPredicted RBP3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 C1orf210Q8IVY1 113 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 AMER2Q8N7J2 671 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 PRPF38AQ8NAV1 312 aaKnown RBP3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 TGFBRAP1Q8WUH2 860 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 CASKIN2Q8WXE0 1202 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 QRSL1Q9H0R6 528 aaKnown RBP3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 DKK2Q9UBU2 259 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 SPEF1Q9Y4P9 236 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 GPR45Q9Y5Y3 372 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 SETD1BQ9UPS6 1966 aaKnown RBP3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 TBKBP1A7MCY6 615 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 B5MCH6 92 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 TRIM24O15164 1050 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 PCDHGA12O60330 932 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 ALOX15P16050 662 aaPredicted RBP3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 TACR2P21452 398 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 SREBF1P36956 1147 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 GUCY2FP51841 1108 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 ZXDAP98168 799 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 SLC25A3Q00325 362 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 CDK17Q00537 523 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 SEPT2Q15019 361 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 VPS72Q15906 364 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 BMT2Q1RMZ1 405 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 FNDC7Q5VTL7 733 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 RHOUQ7L0Q8 258 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 GSPT2Q8IYD1 628 aaKnown RBP3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 ELOA2Q8IYF1 753 aaPredicted RBP3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 TRMT2AQ8IZ69 625 aaKnown RBP3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 RPUSD2Q8IZ73 545 aaKnown RBP3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 OR5M3Q8NGP4 307 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 ZCRB1Q8TBF4 217 aaKnown RBP3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 ARL8AQ96BM9 186 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 FAXDC2Q96IV6 333 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 ACE2Q9BYF1 805 aaPredicted RBP3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 VPS11Q9H270 941 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 DNAJC28Q9NX36 388 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 TRHDEQ9UKU6 1024 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 SIK3Q9Y2K2 1263 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 PCDHGA9Q9Y5G4 932 aaKnown RBP3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 PCDHGA8Q9Y5G5 932 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 PCDHGA7Q9Y5G6 932 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 PCDHGA6Q9Y5G7 932 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 PCDHGA3Q9Y5H0 932 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 PCDHGA2Q9Y5H1 932 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 COL4A3BPQ9Y5P4 624 aa3.18□□□□□ -1.9
RNU6-541P-201ENST00000384709 ZMYM3Q14202 1370 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 SHTN1A0MZ66 631 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 FAM171A2A8MVW0 826 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 DIRC3C9JPN6 131 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 WNT10BO00744 389 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 NARSO43776 548 aaKnown RBP3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 PRAMEF4O60810 478 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 ENDOD1O94919 500 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 AMHP03971 560 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 C1SP09871 688 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 GNAT2P19087 354 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 SLC6A9P48067 706 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 ATP8B2P98198 1209 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 PTH1RQ03431 593 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 PTPROQ16827 1216 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 FAM214AQ32MH5 1076 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 RABL3Q5HYI8 236 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 MFSD14BQ5SR56 506 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 PRAMEF14Q5SWL7 426 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 OTUD7BQ6GQQ9 843 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 JADE3Q92613 823 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 LENG9Q96B70 501 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 CYFIP2Q96F07 1278 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 GPATCH3Q96I76 525 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 CDC5LQ99459 802 aaKnown RBP3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 GPR87Q9BY21 358 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 CPEB1Q9BZB8 566 aaKnown RBP3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 ASPSCR1Q9BZE9 553 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 TYW1Q9NV66 732 aaKnown RBP3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 PARPBPQ9NWS1 579 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 TUBD1Q9UJT1 453 aa3.17□□□□□ -1.9
RNU6-541P-201ENST00000384709 CYR61O00622 381 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 AKR1B10O60218 316 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 FZD7O75084 574 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 C6P13671 934 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 IL2RBP14784 551 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 NR4A1P22736 598 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 ZFP36P26651 326 aaKnown RBP3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 ECHS1P30084 290 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 IARSP41252 1262 aaKnown RBP3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 PURAQ00577 322 aaKnown RBP3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 CNGB1Q14028 1251 aaPredicted RBP3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 NRN1LQ496H8 165 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 TMEM240Q5SV17 173 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms