RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 LRRC8CQ8TDW0 803 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 CASKIN2Q8WXE0 1202 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 NKD1Q969G9 470 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 ERGIC2Q96RQ1 377 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 UHRF1Q96T88 793 aaPredicted RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 Q9H521 79 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 GPHNQ9NQX3 736 aaPredicted RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 SEL1LQ9UBV2 794 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 ZNF711Q9Y462 761 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 ZNF532Q9HCE3 1301 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 CEMIPQ8WUJ3 1361 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 RAD17O75943 681 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 ACADSP16219 412 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 CCNHP51946 323 aaPredicted RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 ATP2C1P98194 919 aaPredicted RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 NR5A1Q13285 461 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 ALX1Q15699 326 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 INAQ16352 499 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 HHATQ5VTY9 493 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 ALG1LQ6GMV1 187 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 TMEM154Q6P9G4 183 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 CREG2Q8IUH2 290 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 IFNL3Q8IZI9 196 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 ANKRD13CQ8N6S4 541 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 MAGEB6Q8N7X4 407 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 USP38Q8NB14 1042 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 OR2W6PQ8NHA6 318 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 GRK7Q8WTQ7 553 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 DNAJC9Q8WXX5 260 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 SYN2Q92777 582 aaPredicted RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 HES6Q96HZ4 224 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 LY9Q9HBG7 655 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 PNO1Q9NRX1 252 aaKnown RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 KLF15Q9UIH9 416 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 IGF2BP3O00425 579 aaKnown RBP eCLIP6.07□□□□□ -1.44
RFC1-202ENST00000381897 MSR1P21757 451 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 GCH1P30793 250 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 MSH2P43246 934 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 GCLCP48506 637 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 GFPT1Q06210 699 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 DHX34Q14147 1143 aaKnown RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 ABCB5Q2M3G0 1257 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ANKRD20A4Q4UJ75 823 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ANKRD20A2Q5SQ80 823 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ANKRD20A1Q5TYW2 823 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ANKRD20A3Q5VUR7 823 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ETFRF1Q6IPR1 90 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 PDXDC1Q6P996 788 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 C16orf86Q6ZW13 317 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 NLRP9Q7RTR0 991 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 JAZF1Q86VZ6 243 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 COL23A1Q86Y22 540 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 PRKD2Q9BZL6 878 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ABCG8Q9H221 673 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 TMEM60Q9H2L4 133 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 DBNDD1Q9H9R9 158 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 IFT122Q9HBG6 1241 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 IL1RAPL1Q9NZN1 696 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 TMEM5Q9Y2B1 443 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 LEMD3Q9Y2U8 911 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 PCDHGA1Q9Y5H4 931 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 USH1CQ9Y6N9 552 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ABCB11O95342 1321 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 GOLGA8QA0A0J9YX86 632 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 CFAP69A5D8W1 941 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 GOLGA8OA6NCC3 632 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 GOLGA8NF8WBI6 632 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 NCK2O43639 380 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ATG7O95352 703 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 FESP07332 822 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 IL2RBP14784 551 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 RENBPP51606 427 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 NR1H3Q13133 447 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 RASA3Q14644 834 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 RABL6Q3YEC7 729 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 NUGGCQ68CJ6 796 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ZNF449Q6P9G9 518 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 BNC2Q6ZN30 1099 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 SESTD1Q86VW0 696 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 BLIDQ8IZY5 108 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 PROM2Q8N271 834 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 TSEN2Q8NCE0 465 aaKnown RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 B4GALNT2Q8NHY0 566 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ST7LQ8TDW4 575 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 TIFAQ96CG3 184 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 NUDCD1Q96RS6 583 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ASCC2Q9H1I8 757 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 ZNF395Q9H8N7 513 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 NLRC4Q9NPP4 1024 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 GDAQ9Y2T3 454 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 FAM208AQ9UK61 1670 aaKnown RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 SOS2Q07890 1332 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 RRN3P2A6NIE6 340 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 LRRC53A6NM62 1247 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 CALUO43852 315 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 RTN3O95197 1032 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 GUCA1CO95843 209 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 PYGLP06737 847 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 SCG2P13521 617 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 GFAPP14136 432 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms