RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 OLFML3Q9NRN5 406 aa17.75■□□□□ 0.43
SNRPB-201ENST00000381342 HES2Q9Y543 173 aa17.75■□□□□ 0.43
SNRPB-201ENST00000381342 COL6A3P12111 3177 aa17.75■□□□□ 0.43
SNRPB-201ENST00000381342 CHD7Q9P2D1 2997 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 PRPF40AO75400 957 aaKnown RBP17.74■□□□□ 0.43
SNRPB-201ENST00000381342 GCNT3O95395 438 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 MYBP10242 640 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 SKIP12755 728 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 CLLU1OSQ5K130 101 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 UNC13DQ70J99 1090 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 SMG8Q8ND04 991 aaKnown RBP17.74■□□□□ 0.43
SNRPB-201ENST00000381342 GLIS3Q8NEA6 775 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 HLA-CQ95604 372 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 ZNF689Q96CS4 500 aaPredicted RBP17.74■□□□□ 0.43
SNRPB-201ENST00000381342 MRPL38Q96DV4 380 aaKnown RBP17.74■□□□□ 0.43
SNRPB-201ENST00000381342 BICD1Q96G01 975 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 ASB2Q96Q27 587 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 ACO2Q99798 780 aaKnown RBP17.74■□□□□ 0.43
SNRPB-201ENST00000381342 APOL6Q9BWW8 343 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 PLVAPQ9BX97 442 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 AAASQ9NRG9 546 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 TBX20Q9UMR3 447 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 IPPQ9Y573 584 aa17.74■□□□□ 0.43
SNRPB-201ENST00000381342 TDRD15B5MCY1 1934 aaKnown RBP17.74■□□□□ 0.43
SNRPB-201ENST00000381342 TBKBP1A7MCY6 615 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 HOXA2O43364 376 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 KLRC4O43908 158 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 PPP1R37O75864 691 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 UBE2HP62256 183 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 GTF2BQ00403 316 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 ZNF568Q3ZCX4 644 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 TIGD5Q53EQ6 642 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 FAM26FQ5R3K3 315 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 ZNF720Q7Z2F6 126 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 MAP4K3Q8IVH8 894 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 HELQQ8TDG4 1101 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 KCNN1Q92952 543 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 GBP4Q96PP9 640 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 ADPGKQ9BRR6 497 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 LMAN2LQ9H0V9 348 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 IKZF4Q9H2S9 585 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 ST6GALNAC4Q9H4F1 302 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 ANKFY1Q9P2R3 1169 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 TNFSF13BQ9Y275 285 aa17.73■□□□□ 0.43
SNRPB-201ENST00000381342 HNRNPDLO14979 420 aaKnown RBP17.72■□□□□ 0.43
SNRPB-201ENST00000381342 ZNF623O75123 536 aa17.72■□□□□ 0.43
SNRPB-201ENST00000381342 EOMESO95936 686 aa17.72■□□□□ 0.43
SNRPB-201ENST00000381342 HARSP12081 509 aaKnown RBP17.72■□□□□ 0.43
SNRPB-201ENST00000381342 SCP2P22307 547 aa17.72■□□□□ 0.43
SNRPB-201ENST00000381342 EHHADHQ08426 723 aa17.72■□□□□ 0.43
SNRPB-201ENST00000381342 DCAF4L1Q3SXM0 396 aa17.72■□□□□ 0.43
SNRPB-201ENST00000381342 AGMOQ6ZNB7 445 aa17.72■□□□□ 0.43
SNRPB-201ENST00000381342 MRPL10Q7Z7H8 261 aaKnown RBP17.72■□□□□ 0.43
SNRPB-201ENST00000381342 ZBTB33Q86T24 672 aa17.72■□□□□ 0.43
SNRPB-201ENST00000381342 ABI1Q8IZP0 508 aa17.72■□□□□ 0.43
SNRPB-201ENST00000381342 CLP1Q92989 425 aaKnown RBP17.72■□□□□ 0.43
SNRPB-201ENST00000381342 HVCN1Q96D96 273 aa17.72■□□□□ 0.43
SNRPB-201ENST00000381342 ZBTB45Q96K62 511 aaPredicted RBP17.72■□□□□ 0.43
SNRPB-201ENST00000381342 STRA6Q9BX79 667 aa17.72■□□□□ 0.43
SNRPB-201ENST00000381342 CDT1Q9H211 546 aa17.72■□□□□ 0.43
SNRPB-201ENST00000381342 HCSTQ9UBK5 93 aa17.72■□□□□ 0.43
SNRPB-201ENST00000381342 CITO14578 2027 aa17.72■□□□□ 0.43
SNRPB-201ENST00000381342 PRRC2BQ5JSZ5 2229 aaKnown RBP17.71■□□□□ 0.43
SNRPB-201ENST00000381342 PVALEFA0A1B0GWK0 134 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 C5orf67F2Z3F1 127 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 ABLIM1O14639 778 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 PIGRP01833 764 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 RPN1P04843 607 aaKnown RBP17.71■□□□□ 0.43
SNRPB-201ENST00000381342 MYL1P05976 194 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 ITGA4P13612 1032 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 PROZP22891 400 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 LIG4P49917 911 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 KCNA1Q09470 495 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 DPYDQ12882 1025 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 PNOCQ13519 176 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 POSTNQ15063 836 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 L1TD1Q5T7N2 865 aaKnown RBP17.71■□□□□ 0.43
SNRPB-201ENST00000381342 SLC39A4Q6P5W5 647 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 MPZL3Q6UWV2 235 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 ZPBP2Q6X784 338 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 CEP120Q8N960 986 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 PGBD4Q96DM1 585 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 CASD1Q96PB1 797 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 TMEM117Q9H0C3 514 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 RNF39Q9H2S5 420 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 RSAD1Q9HA92 442 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 PTPRHQ9HD43 1115 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 EXOC1Q9NV70 894 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 INPP5FQ9Y2H2 1132 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 PCDHB12Q9Y5F1 795 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 MRPL42Q9Y6G3 142 aaKnown RBP17.71■□□□□ 0.43
SNRPB-201ENST00000381342 TRIP11Q15643 1979 aa17.71■□□□□ 0.43
SNRPB-201ENST00000381342 PDCD11Q14690 1871 aaKnown RBP17.71■□□□□ 0.43
SNRPB-201ENST00000381342 ZMYM2Q9UBW7 1377 aa17.7■□□□□ 0.42
SNRPB-201ENST00000381342 TISP43B9A030 160 aa17.7■□□□□ 0.42
SNRPB-201ENST00000381342 KINO60870 393 aaKnown RBP17.7■□□□□ 0.42
SNRPB-201ENST00000381342 TOM1L1O75674 476 aa17.7■□□□□ 0.42
SNRPB-201ENST00000381342 AKAP5P24588 427 aa17.7■□□□□ 0.42
SNRPB-201ENST00000381342 ABCD1P33897 745 aa17.7■□□□□ 0.42
SNRPB-201ENST00000381342 NOLC1Q14978 699 aaKnown RBP eCLIP17.7■□□□□ 0.424e-9■■■■■ 27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms