RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 BECN2A8MW95 431 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 KRIT1O00522 736 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 ZNF213O14771 459 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 CTAGE5O15320 804 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 KINO60870 393 aaKnown RBP4.26□□□□□ -1.73
SMC6-202ENST00000381272 TADA3O75528 432 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 IL2RBP14784 551 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 HSPA2P54652 639 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 ANTXR2P58335 489 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 EVA1CP58658 441 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 NKX3-2P78367 333 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 CHAF1AQ13111 956 aaPredicted RBP4.26□□□□□ -1.73
SMC6-202ENST00000381272 IFIT5Q13325 482 aaKnown RBP4.26□□□□□ -1.73
SMC6-202ENST00000381272 SMAD4Q13485 552 aaKnown RBP4.26□□□□□ -1.73
SMC6-202ENST00000381272 SF3A1Q15459 793 aaKnown RBP4.26□□□□□ -1.73
SMC6-202ENST00000381272 HLFQ16534 295 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 TPD52L1Q16890 204 aaPredicted RBP4.26□□□□□ -1.73
SMC6-202ENST00000381272 IMMTQ16891 758 aaKnown RBP4.26□□□□□ -1.73
SMC6-202ENST00000381272 METTL24Q5JXM2 366 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 BRINP3Q76B58 766 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 SPATC1Q76KD6 591 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.26□□□□□ -1.73
SMC6-202ENST00000381272 DHX40Q8IX18 779 aaKnown RBP4.26□□□□□ -1.73
SMC6-202ENST00000381272 CARFQ8N187 725 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 FAM26EQ8N5C1 309 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 AOPEPQ8N6M6 819 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 KYQ8NBH2 561 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 PHOSPHO1Q8TCT1 267 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 C8orf76Q96K31 380 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 C16orf45Q96MC5 204 aaPredicted RBP4.26□□□□□ -1.73
SMC6-202ENST00000381272 SPATA25Q9BR10 227 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 C11orf84Q9BUA3 381 aaPredicted RBP4.26□□□□□ -1.73
SMC6-202ENST00000381272 CDIP1Q9H305 208 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 INCENPQ9NQS7 918 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 RTEL1Q9NZ71 1219 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 ORC3Q9UBD5 711 aaPredicted RBP4.26□□□□□ -1.73
SMC6-202ENST00000381272 KIF3AQ9Y496 699 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 SPEF2Q9C093 1822 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 PAPPAQ13219 1627 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 AKAP11Q9UKA4 1901 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 XIRP1Q702N8 1843 aaKnown RBP4.26□□□□□ -1.73
SMC6-202ENST00000381272 C4AP0C0L4 1744 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 C4BP0C0L5 1744 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 TOGARAM1Q9Y4F4 1720 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 USP27XA6NNY8 438 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 KIF28PB7ZC32 967 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 GPAA1O43292 621 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 MSCO60682 206 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 APPP05067 770 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 PCCAP05165 728 aaPredicted RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 CSF1RP07333 972 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 TNNT1P13805 278 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 RXRAP19793 462 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 STAT5AP42229 794 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 MCAMP43121 646 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 SARSP49591 514 aaKnown RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 NDUFA8P51970 172 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 SSRP1Q08945 709 aaKnown RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 STK38Q15208 465 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 ATP2B3Q16720 1220 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 KIZQ2M2Z5 673 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 YOD1Q5VVQ6 348 aaPredicted RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 ISM2Q6H9L7 571 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 STYK1Q6J9G0 422 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 KCNT2Q6UVM3 1135 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 LBX2Q6XYB7 198 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 KIF6Q6ZMV9 814 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 CYB5R4Q7L1T6 521 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 FRMD5Q7Z6J6 570 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 FILIP1Q7Z7B0 1213 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 RALYLQ86SE5 291 aaKnown RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 MB21D2Q8IYB1 491 aaPredicted RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 TTLL6Q8N841 843 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 ARRDC4Q8NCT1 418 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 NCOA7Q8NI08 942 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 PIGBQ92521 554 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 MRPS27Q92552 414 aaKnown RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 APPBP2Q92624 585 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 TOE1Q96GM8 510 aaKnown RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 AIFM3Q96NN9 605 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 SDF4Q9BRK5 362 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 JAM3Q9BX67 310 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 SMOC1Q9H4F8 434 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 GREM2Q9H772 168 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 SLC6A20Q9NP91 592 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 PIH1D3Q9NQM4 214 aaKnown RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 SPATA6Q9NWH7 488 aaPredicted RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 TMOD3Q9NYL9 352 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 MYOTQ9UBF9 498 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 CTNNA3Q9UI47 895 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 TCRBV5S2A0A599 114 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 CPLX1O14810 134 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 SPTLC2O15270 562 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 ZFYP08048 801 aaPredicted RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 MARCKSP29966 332 aaPredicted RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 EVCP57679 992 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 GPR85P60893 370 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 CBX1P83916 185 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 NTRK3Q16288 839 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms