RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 PGRMC1O00264 195 aaKnown RBP11.4□□□□□ -0.59
CLCN4-202ENST00000380833 ARL4AP40617 200 aa11.4□□□□□ -0.59
CLCN4-202ENST00000380833 LBRQ14739 615 aaKnown RBP11.4□□□□□ -0.59
CLCN4-202ENST00000380833 SYCP2LQ5T4T6 812 aa11.4□□□□□ -0.59
CLCN4-202ENST00000380833 CDKL2Q92772 493 aa11.4□□□□□ -0.59
CLCN4-202ENST00000380833 LLPHQ9BRT6 129 aaKnown RBP11.4□□□□□ -0.59
CLCN4-202ENST00000380833 RPF1Q9H9Y2 349 aaKnown RBP11.4□□□□□ -0.59
CLCN4-202ENST00000380833 KIF21AQ7Z4S6 1674 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 ASMTLO95671 621 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 MMP10P09238 476 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 CTSHP09668 335 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 DEPDC1Q5TB30 811 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 LENG1Q96BZ8 264 aaPredicted RBP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 MLPHQ9BV36 600 aaPredicted RBP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 ADD3Q9UEY8 706 aaKnown RBP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 DOLKQ9UPQ8 538 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 APOBEC2Q9Y235 224 aaKnown RBP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 TBX22Q9Y458 520 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 HMBSP08397 361 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 PSMA4P25789 261 aaKnown RBP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 EXOC3L4Q17RC7 722 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 WRNIP1Q96S55 665 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 MT-ND3P03897 115 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 ZCCHC18P0CG32 403 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 ATF4P18848 351 aaPredicted RBP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 CYP27A1Q02318 531 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 ME3Q16798 604 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 DNAL1Q4LDG9 190 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 RFX8Q6ZV50 586 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 RNF135Q8IUD6 432 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 PBXIP1Q96AQ6 731 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 NT5C1BQ96P26 610 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 PAIP1Q9H074 479 aaKnown RBP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 TMCO1Q9UM00 188 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 CCDC162PA2VCL2 907 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 GSTT1P30711 240 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 COPB2P35606 906 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 EN1Q05925 392 aaPredicted RBP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 PIGOQ8TEQ8 1089 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 USP28Q96RU2 1077 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 NQO1P15559 274 aaKnown RBP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 GCLCP48506 637 aaPredicted RBP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 NR1H3Q13133 447 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 C10orf76Q5T2E6 689 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 KLC2Q9H0B6 622 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 ADNPQ9H2P0 1102 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 CHMP1AQ9HD42 196 aaPredicted RBP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 CORO1CQ9ULV4 474 aaPredicted RBP11.39□□□□□ -0.59
CLCN4-202ENST00000380833 ZBTB1Q9Y2K1 713 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 SPEF1Q9Y4P9 236 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 COL4A3BPQ9Y5P4 624 aa11.39□□□□□ -0.59
CLCN4-202ENST00000380833 CCDC22O60826 627 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 CLPTM1O96005 669 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 HSPA1AP0DMV8 641 aaKnown RBP11.38□□□□□ -0.59
CLCN4-202ENST00000380833 HSPA1BP0DMV9 641 aaKnown RBP11.38□□□□□ -0.59
CLCN4-202ENST00000380833 CPB1P15086 417 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 CA4P22748 312 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 LSP1P33241 339 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 FANCBQ8NB91 859 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 LBHD1Q9BQE6 289 aaPredicted RBP11.38□□□□□ -0.59
CLCN4-202ENST00000380833 CPVLQ9H3G5 476 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 USP15Q9Y4E8 981 aaPredicted RBP11.38□□□□□ -0.59
CLCN4-202ENST00000380833 KITP10721 976 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 NR2F2P24468 414 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 PEX5P50542 639 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 PMS2P54278 862 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 MFAP3P55082 362 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 SEPT12Q8IYM1 358 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 PPP1R36Q96LQ0 422 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 FAM107AO95990 144 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 ARFIP2P53365 341 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 PCGF5Q86SE9 256 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 SNPHO15079 494 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 CYTH3O43739 400 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 HSPD1P10809 573 aaKnown RBP11.38□□□□□ -0.59
CLCN4-202ENST00000380833 PTK2BQ14289 1009 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 PTGISQ16647 500 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 CNPY3Q9BT09 278 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 NGRNQ9NPE2 291 aaKnown RBP11.38□□□□□ -0.59
CLCN4-202ENST00000380833 ZSCAN9O15535 394 aaPredicted RBP11.38□□□□□ -0.59
CLCN4-202ENST00000380833 CASP14P31944 242 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 MMP14P50281 582 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 LRRC36Q1X8D7 754 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 PRAMEF18Q5VWM3 479 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 ACAP3Q96P50 834 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 SPON2Q9BUD6 331 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 MSTO1Q9BUK6 570 aa11.38□□□□□ -0.59
CLCN4-202ENST00000380833 APOL1O14791 398 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 ATP9AO75110 1047 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 TTLL1O95922 423 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 PRR29P0C7W0 189 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 SOX11P35716 441 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 TMEM62Q0P6H9 643 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 SYDE2Q5VT97 1194 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 TOGARAM2Q6ZUX3 1019 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 RHPN2Q8IUC4 686 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 PPHLN1Q8NEY8 458 aaKnown RBP11.37□□□□□ -0.59
CLCN4-202ENST00000380833 VPS37AQ8NEZ2 397 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms