RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 DCAF12L1Q5VU92 463 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 XRRA1Q6P2D8 792 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 ABHD15Q6UXT9 468 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 TAS1R3Q7RTX0 852 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 ACTRT1Q8TDG2 376 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 CTNNBL1Q8WYA6 563 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 RUBCNQ92622 972 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 PBKQ96KB5 322 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 PCDHB18PQ96TA0 734 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 NTPCRQ9BSD7 190 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 ACBD3Q9H3P7 528 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 ACAD9Q9H845 621 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 SUCLA2Q9P2R7 463 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 SEPT9Q9UHD8 586 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 PNMA2Q9UL42 364 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 NOC2LQ9Y3T9 749 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 CD2APQ9Y5K6 639 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 LOC285556D6RIA3 1793 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 ATP2A1O14983 1001 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 P4HA2O15460 535 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 CHRNB2P17787 502 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 ATP4AP20648 1035 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 TNFRSF8P28908 595 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 TREML2Q5T2D2 321 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 TAF3Q5VWG9 929 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 OTUD6AQ7L8S5 288 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 SLC47A2Q86VL8 602 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 RPUSD2Q8IZ73 545 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 PPM1KQ8N3J5 372 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 RDM1Q8NG50 284 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 DDX47Q9H0S4 455 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 CYP26B1Q9NR63 512 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 NR2E1Q9Y466 385 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 GOLGA6BA6NDN3 693 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 GRXCR2A6NFK2 248 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 SPATA31C2B4DYI2 1134 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 MAPK13O15264 365 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 CYP26A1O43174 497 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 USP2O75604 605 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 CALCAP01258 141 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 FTLP02792 175 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 PSAPP07602 524 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 ABL2P42684 1182 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 CETN1Q12798 172 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 MTERF2Q49AM1 385 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 CYFIP1Q7L576 1253 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 NOP9Q86U38 636 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 IFT20Q8IY31 132 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 TAS1R2Q8TE23 839 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 LMBR1Q8WVP7 490 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 POMGNT1Q8WZA1 660 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 ATP6V0A1Q93050 837 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 IWS1Q96ST2 819 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.6□□□□□ -1.036e-6■■□□□ 11.7
PDLIM5-204ENST00000380176 TMOD4Q9NZQ9 345 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 ANKRD62A6NC57 917 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 DDX3YO15523 660 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 CCDC172P0C7W6 258 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 GUCY2FP51841 1108 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 SNRPFP62306 86 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 EMBQ6PCB8 327 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 SYCE1Q8N0S2 351 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 RASGEF1CQ8N431 466 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 EPS8L1Q8TE68 723 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 SPIRE2Q8WWL2 714 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 DHX38Q92620 1227 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 KIFAP3Q92845 792 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 TATDN2Q93075 761 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 PI4K2AQ9BTU6 479 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 R3HDMLQ9H3Y0 253 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 HOXC10Q9NYD6 342 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 PSD3Q9NYI0 1048 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 NOCTQ9UK39 431 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 AMFRQ9UKV5 643 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 EXOC7Q9UPT5 735 aa8.6□□□□□ -1.03
PDLIM5-204ENST00000380176 NFASCO94856 1347 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 PGRMC1O00264 195 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 HNRNPDLO14979 420 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 SART1O43290 800 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 ATMINO43313 823 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 DLATP10515 647 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 WNT7BP56706 349 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 MCCD1P59942 119 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 ERVK-9P63128 1117 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 TNNC1P63316 161 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 PRPF4BQ13523 1007 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 VGLL4Q14135 290 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 KRT39Q6A163 491 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 AADACL2Q6P093 401 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 DDX42Q86XP3 938 aaKnown RBP eCLIP8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 FAM71AQ8IYT1 594 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 HELQQ8TDG4 1101 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 CAVIN3Q969G5 261 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 PBXIP1Q96AQ6 731 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 MFSD14AQ96MC6 490 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 FBXL18Q96ME1 805 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 POLR3FQ9H1D9 316 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 ISCUQ9H1K1 167 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 KRIT1O00522 736 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms