RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 MCF2L2Q86YR7 1114 aa13.08□□□□□ -0.32
RFC3-201ENST00000380071 RAPGEF5Q92565 580 aa13.08□□□□□ -0.32
RFC3-201ENST00000380071 CD101Q93033 1021 aa13.08□□□□□ -0.32
RFC3-201ENST00000380071 CYFIP2Q96F07 1278 aa13.08□□□□□ -0.32
RFC3-201ENST00000380071 FAM84AQ96KN4 292 aa13.08□□□□□ -0.32
RFC3-201ENST00000380071 RPS6KC1Q96S38 1066 aa13.08□□□□□ -0.32
RFC3-201ENST00000380071 PAGR1Q9BTK6 254 aa13.08□□□□□ -0.32
RFC3-201ENST00000380071 NUP85Q9BW27 656 aa13.08□□□□□ -0.32
RFC3-201ENST00000380071 TBX20Q9UMR3 447 aa13.08□□□□□ -0.32
RFC3-201ENST00000380071 PHF20L1A8MW92 1017 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 GZMAP12544 262 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 CNGA1P29973 690 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 KCNJ1P48048 391 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 IFT88Q13099 833 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 CCDC137Q6PK04 289 aaKnown RBP13.07□□□□□ -0.32
RFC3-201ENST00000380071 NSMFQ6X4W1 530 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 C4orf19Q8IY42 314 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 TMEM161BQ8NDZ6 487 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 ZNF564Q8TBZ8 553 aaPredicted RBP13.07□□□□□ -0.32
RFC3-201ENST00000380071 HELQQ8TDG4 1101 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 PARD3BQ8TEW8 1205 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 DHX38Q92620 1227 aaKnown RBP13.07□□□□□ -0.32
RFC3-201ENST00000380071 VTI1AQ96AJ9 217 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 PSMD1Q99460 953 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 ST6GALNAC4Q9H4F1 302 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 TBC1D22BQ9NU19 505 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 PNMA2Q9UL42 364 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 PCDHA3Q9Y5H8 950 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 KIAA0754O94854 1291 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 CYP11B1P15538 503 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 CHRNA3P32297 505 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 NPTX2P47972 431 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 DRG2P55039 364 aaKnown RBP13.07□□□□□ -0.32
RFC3-201ENST00000380071 MFAP3P55082 362 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
RFC3-201ENST00000380071 SLC29A2Q14542 456 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 RNF187Q5TA31 235 aaPredicted RBP13.07□□□□□ -0.32
RFC3-201ENST00000380071 UHMK1Q8TAS1 419 aaKnown RBP13.07□□□□□ -0.32
RFC3-201ENST00000380071 BSNDQ8WZ55 320 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 SHC3Q92529 594 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 TATDN2Q93075 761 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 TLCD1Q96CP7 247 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 PABPC3Q9H361 631 aaKnown RBP13.07□□□□□ -0.32
RFC3-201ENST00000380071 SEMA4AQ9H3S1 761 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 PCYOX1Q9UHG3 505 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 DDX20Q9UHI6 824 aaKnown RBP13.07□□□□□ -0.32
RFC3-201ENST00000380071 PTPN22Q9Y2R2 807 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 CAPN7Q9Y6W3 813 aa13.07□□□□□ -0.32
RFC3-201ENST00000380071 TLDC2A0PJX2 215 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 SRRM3A6NNA2 597 aaPredicted RBP13.06□□□□□ -0.32
RFC3-201ENST00000380071 WNT10BO00744 389 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 MAPK13O15264 365 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 PSMC5P62195 406 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 FKBP1CQ5VVH2 108 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 KRT39Q6A163 491 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 C6orf89Q6UWU4 347 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 ANO5Q75V66 913 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 FAM83AQ86UY5 434 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 SPATS2Q86XZ4 545 aaKnown RBP13.06□□□□□ -0.32
RFC3-201ENST00000380071 TAS1R2Q8TE23 839 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 WNT8AQ9H1J5 351 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 SLC38A10Q9HBR0 1119 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 USP20Q9Y2K6 914 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 UTRNP46939 3433 aa13.06□□□□□ -0.32
RFC3-201ENST00000380071 TESPA1A2RU30 521 aaPredicted RBP13.05□□□□□ -0.32
RFC3-201ENST00000380071 DENND3A2RUS2 1198 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 SMIM23A6NLE4 172 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 PMM2O15305 246 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 SPOPO43791 374 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 MTA2O94776 668 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 CYP1A2P05177 515 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 RARAP10276 462 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 FNTAP49354 379 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 EIF3BP55884 814 aaKnown RBP13.05□□□□□ -0.32
RFC3-201ENST00000380071 MAP3K10Q02779 954 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 SIX1Q15475 284 aaPredicted RBP13.05□□□□□ -0.32
RFC3-201ENST00000380071 CLUL1Q15846 466 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 SPDYCQ5MJ68 293 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 SEL1L2Q5TEA6 688 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 SLC39A4Q6P5W5 647 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 SLC13A5Q86YT5 568 aaPredicted RBP13.05□□□□□ -0.32
RFC3-201ENST00000380071 ZNF653Q96CK0 615 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 RMDN3Q96TC7 470 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 PI4K2AQ9BTU6 479 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.05□□□□□ -0.32
RFC3-201ENST00000380071 RASAL2Q9UJF2 1139 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 TELO2Q9Y4R8 837 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 PSME4Q14997 1843 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 ATXN2Q99700 1313 aaKnown RBP13.05□□□□□ -0.32
RFC3-201ENST00000380071 WDR46O15213 610 aaKnown RBP13.05□□□□□ -0.32
RFC3-201ENST00000380071 GRIN3BO60391 1043 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 NUDT17P0C025 328 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 GHRHRQ02643 423 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 MICALCLQ6ZW33 695 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 CCDC105Q8IYK2 499 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 DDX1Q92499 740 aaKnown RBP13.05□□□□□ -0.32
RFC3-201ENST00000380071 PDCD2LQ9BRP1 358 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 PDGFDQ9GZP0 370 aaPredicted RBP13.05□□□□□ -0.32
RFC3-201ENST00000380071 RAB20Q9NX57 234 aa13.05□□□□□ -0.32
RFC3-201ENST00000380071 PODXLO00592 558 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms