RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 ASCC2Q9H1I8 757 aaPredicted RBP16.04■□□□□ 0.16
PRNP-201ENST00000379440 SPON1Q9HCB6 807 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 DAAM1Q9Y4D1 1078 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 LOC285556D6RIA3 1793 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 ATP8B3O60423 1300 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 CYP24A1Q07973 514 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 TTLL12Q14166 644 aaPredicted RBP16.04■□□□□ 0.16
PRNP-201ENST00000379440 MAP9Q49MG5 647 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
PRNP-201ENST00000379440 C8orf74Q6P047 294 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 CCDC91Q7Z6B0 441 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 RPUSD2Q8IZ73 545 aaKnown RBP16.04■□□□□ 0.16
PRNP-201ENST00000379440 GPD1LQ8N335 351 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 ASAP3Q8TDY4 903 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 MAF1Q9H063 256 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 MYO1CO00159 1063 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 PMM2O15305 246 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 BUB1BO60566 1050 aaPredicted RBP16.03■□□□□ 0.16
PRNP-201ENST00000379440 CNMDO75829 334 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 FARP2O94887 1054 aaPredicted RBP16.03■□□□□ 0.16
PRNP-201ENST00000379440 PGK2P07205 417 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 MCCD1P59942 119 aaPredicted RBP16.03■□□□□ 0.16
PRNP-201ENST00000379440 PPATQ06203 517 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 FMNL3Q8IVF7 1028 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 METTL13Q8N6R0 699 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 CTNNBL1Q8WYA6 563 aaPredicted RBP16.03■□□□□ 0.16
PRNP-201ENST00000379440 TMEM8AQ9HCN3 771 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 TXNRD2Q9NNW7 524 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 STXBP5LQ9Y2K9 1186 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 CYP26A1O43174 497 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 CEP104O60308 925 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 ZBTB48P10074 688 aaPredicted RBP16.03■□□□□ 0.16
PRNP-201ENST00000379440 SSR1P43307 286 aaKnown RBP16.03■□□□□ 0.16
PRNP-201ENST00000379440 LY6KQ17RY6 165 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 SV2AQ7L0J3 742 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 NT5DC3Q86UY8 548 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 LMBR1Q8WVP7 490 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 RFFLQ8WZ73 363 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 KRT12Q99456 494 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 SELENOOQ9BVL4 669 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 DHX33Q9H6R0 707 aaKnown RBP16.03■□□□□ 0.16
PRNP-201ENST00000379440 STIM2Q9P246 746 aa16.03■□□□□ 0.16
PRNP-201ENST00000379440 GLRA2P23416 452 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 EDNRBP24530 442 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 Q3C1V9 767 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 DNAJC21Q5F1R6 531 aaKnown RBP16.02■□□□□ 0.16
PRNP-201ENST00000379440 LMBRD2Q68DH5 695 aaPredicted RBP16.02■□□□□ 0.16
PRNP-201ENST00000379440 NOP9Q86U38 636 aaKnown RBP16.02■□□□□ 0.16
PRNP-201ENST00000379440 SLC47A2Q86VL8 602 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 ERO1BQ86YB8 467 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 USP38Q8NB14 1042 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 PROCA1Q8NCQ7 364 aaPredicted RBP16.02■□□□□ 0.16
PRNP-201ENST00000379440 HELQQ8TDG4 1101 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 TMC2Q8TDI7 906 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 CDCA5Q96FF9 252 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 CEP89Q96ST8 783 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 PCDHB18PQ96TA0 734 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 PI4K2AQ9BTU6 479 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 COG5Q9UP83 839 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 COQ4Q9Y3A0 265 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 NCANO14594 1321 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 IGKV6D-21A0A0A0MT36 114 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 ZSCAN5CA6NGD5 496 aaPredicted RBP16.02■□□□□ 0.16
PRNP-201ENST00000379440 LRRIQ4A6NIV6 560 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 GLI1P08151 1106 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 YBX3P16989 372 aaKnown RBP eCLIP16.02■□□□□ 0.164e-7■■■■□ 20.5
PRNP-201ENST00000379440 GARTP22102 1010 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 LIG4P49917 911 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 PRPF4BQ13523 1007 aaKnown RBP16.02■□□□□ 0.16
PRNP-201ENST00000379440 C9orf131Q5VYM1 1079 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 FAM71AQ8IYT1 594 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 ANKRD13AQ8IZ07 590 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 FBXL13Q8NEE6 735 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 TATDN2Q93075 761 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 ZBTB45Q96K62 511 aaPredicted RBP16.02■□□□□ 0.16
PRNP-201ENST00000379440 PORCNQ9H237 461 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 RAB20Q9NX57 234 aa16.02■□□□□ 0.16
PRNP-201ENST00000379440 CHORDC1Q9UHD1 332 aaPredicted RBP16.02■□□□□ 0.16
PRNP-201ENST00000379440 PAPPA2Q9BXP8 1791 aa16.02■□□□□ 0.15
PRNP-201ENST00000379440 ANKRD62A6NC57 917 aa16.02■□□□□ 0.15
PRNP-201ENST00000379440 FTLP02792 175 aaPredicted RBP16.02■□□□□ 0.15
PRNP-201ENST00000379440 CHRNB2P17787 502 aa16.02■□□□□ 0.15
PRNP-201ENST00000379440 WNT7BP56706 349 aa16.02■□□□□ 0.15
PRNP-201ENST00000379440 EPS8L1Q8TE68 723 aa16.02■□□□□ 0.15
PRNP-201ENST00000379440 AENQ8WTP8 325 aaKnown RBP16.02■□□□□ 0.15
PRNP-201ENST00000379440 ZNF516Q92618 1163 aa16.02■□□□□ 0.15
PRNP-201ENST00000379440 DHX38Q92620 1227 aaKnown RBP16.02■□□□□ 0.15
PRNP-201ENST00000379440 HAPLN2Q9GZV7 340 aa16.02■□□□□ 0.15
PRNP-201ENST00000379440 TTC36A6NLP5 189 aa16.01■□□□□ 0.15
PRNP-201ENST00000379440 GGPS1O95749 300 aa16.01■□□□□ 0.15
PRNP-201ENST00000379440 ACOT2P49753 483 aa16.01■□□□□ 0.15
PRNP-201ENST00000379440 GPC3P51654 580 aa16.01■□□□□ 0.15
PRNP-201ENST00000379440 MFAP3P55082 362 aa16.01■□□□□ 0.15
PRNP-201ENST00000379440 KCTD19Q17RG1 926 aaPredicted RBP16.01■□□□□ 0.15
PRNP-201ENST00000379440 KLHL7Q8IXQ5 586 aa16.01■□□□□ 0.15
PRNP-201ENST00000379440 SYCE1Q8N0S2 351 aa16.01■□□□□ 0.15
PRNP-201ENST00000379440 SLC7A3Q8WY07 619 aa16.01■□□□□ 0.15
PRNP-201ENST00000379440 CCDC102AQ96A19 550 aa16.01■□□□□ 0.15
PRNP-201ENST00000379440 PBKQ96KB5 322 aa16.01■□□□□ 0.15
PRNP-201ENST00000379440 SUCLA2Q9P2R7 463 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms