RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 AKAP5P24588 427 aa19.8■□□□□ 0.76
PDLIM4-202ENST00000379018 DSC1Q08554 894 aa19.8■□□□□ 0.76
PDLIM4-202ENST00000379018 OTUD6AQ7L8S5 288 aa19.8■□□□□ 0.76
PDLIM4-202ENST00000379018 NEK8Q86SG6 692 aa19.8■□□□□ 0.76
PDLIM4-202ENST00000379018 FBXL16Q8N461 479 aa19.8■□□□□ 0.76
PDLIM4-202ENST00000379018 NT5C3AQ9H0P0 336 aa19.8■□□□□ 0.76
PDLIM4-202ENST00000379018 CSRNP2Q9H175 543 aa19.8■□□□□ 0.76
PDLIM4-202ENST00000379018 KCNMB3Q9NPA1 279 aa19.8■□□□□ 0.76
PDLIM4-202ENST00000379018 SIT1Q9Y3P8 196 aa19.8■□□□□ 0.76
PDLIM4-202ENST00000379018 NCBP1Q09161 790 aaKnown RBP19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 EPHA7Q15375 998 aa19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 DCLRE1AQ6PJP8 1040 aa19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 PRSS55Q6UWB4 352 aaPredicted RBP19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 CYP26C1Q6V0L0 522 aa19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 PIK3AP1Q6ZUJ8 805 aa19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 CENPQQ7L2Z9 268 aaPredicted RBP19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 DGLUCYQ7Z3D6 616 aa19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 POTEDQ86YR6 584 aa19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 TPH2Q8IWU9 490 aa19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 C4orf19Q8IY42 314 aa19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 RNF168Q8IYW5 571 aaPredicted RBP19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 HASPINQ8TF76 798 aa19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 FAM20AQ96MK3 541 aa19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 PARP2Q9UGN5 583 aa19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 PPME1Q9Y570 386 aa19.79■□□□□ 0.76
PDLIM4-202ENST00000379018 DMXL1Q9Y485 3027 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 CACNA1IQ9P0X4 2223 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 MED19A0JLT2 244 aaPredicted RBP19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 ASAP2O43150 1006 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 B4GALT5O43286 388 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 LRRN2O75325 713 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 NPTXRO95502 500 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 AXLP30530 894 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 PTENP60484 403 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 HTR4Q13639 388 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 TFDP1Q14186 410 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 USP41Q3LFD5 358 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 GALNT17Q6IS24 598 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 ZC3H14Q6PJT7 736 aaKnown RBP19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 CPLX2Q6PUV4 134 aaKnown RBP19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 POTEGQ6S5H5 508 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 RUFY3Q7L099 469 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 HACE1Q8IYU2 909 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 ASAP3Q8TDY4 903 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 HAS1Q92839 578 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 CCDC43Q96MW1 224 aaKnown RBP19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 PRKD2Q9BZL6 878 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 PLEKHA4Q9H4M7 779 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 XPNPEP1Q9NQW7 623 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 ZDHHC7Q9NXF8 308 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 ADAM28Q9UKQ2 775 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 POLIQ9UNA4 740 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 MYH15Q9Y2K3 1946 aa19.78■□□□□ 0.76
PDLIM4-202ENST00000379018 TADA2AO75478 443 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 SP9P0CG40 484 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 ARF4P18085 180 aaPredicted RBP19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 FSHRP23945 695 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 EVCP57679 992 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 NTHL1P78549 312 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 MBTD1Q05BQ5 628 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 GRASPQ7Z6J2 395 aaPredicted RBP19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 CEP57Q86XR8 500 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 C1orf210Q8IVY1 113 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 DCLK2Q8N568 766 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 NXPE3Q969Y0 559 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 CCDC51Q96ER9 411 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 RPP25Q9BUL9 199 aaKnown RBP19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 SEMA4AQ9H3S1 761 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 ZSWIM4Q9H7M6 989 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 CHST7Q9NS84 486 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 GJB4Q9NTQ9 266 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 GIT1Q9Y2X7 761 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 ZNF292O60281 2723 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 COL4A3Q01955 1670 aa19.77■□□□□ 0.76
PDLIM4-202ENST00000379018 MIA3Q5JRA6 1907 aa19.76■□□□□ 0.75
PDLIM4-202ENST00000379018 POTEMA6NI47 508 aa19.76■□□□□ 0.75
PDLIM4-202ENST00000379018 EFEMP2O95967 443 aa19.76■□□□□ 0.75
PDLIM4-202ENST00000379018 GCFC2P16383 781 aaKnown RBP19.76■□□□□ 0.75
PDLIM4-202ENST00000379018 CAPSQ13938 189 aa19.76■□□□□ 0.75
PDLIM4-202ENST00000379018 MXD4Q14582 209 aaPredicted RBP19.76■□□□□ 0.75
PDLIM4-202ENST00000379018 OXER1Q8TDS5 423 aa19.76■□□□□ 0.75
PDLIM4-202ENST00000379018 HDAC7Q8WUI4 952 aa19.76■□□□□ 0.75
PDLIM4-202ENST00000379018 RHOBTB2Q9BYZ6 727 aa19.76■□□□□ 0.75
PDLIM4-202ENST00000379018 CYP46A1Q9Y6A2 500 aa19.76■□□□□ 0.75
PDLIM4-202ENST00000379018 CASTOR2A6NHX0 329 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 CCL16O15467 120 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 ZMYND10O75800 440 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 REC8O95072 547 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 GLULP15104 373 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 GPC5P78333 572 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 GRIK3Q13003 919 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 SNW1Q13573 536 aaKnown RBP19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 RTP2Q5QGT7 225 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 LIN9Q5TKA1 542 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 PPP4R3AQ6IN85 833 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 PHLDB3Q6NSJ2 640 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 PARM1Q6UWI2 310 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 PJA1Q8NG27 643 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms