RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 K7ERI5 159 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 EIF3HO15372 352 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 RPS6KA4O75676 772 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 HSPA8P11142 646 aaKnown RBP12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 PMLP29590 882 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 HMGCS2P54868 508 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 OLFM3Q96PB7 478 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 FBXO2Q9UK22 296 aaPredicted RBP12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 SPHKAPQ2M3C7 1700 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 TCP11X1B4DZS4 312 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 DIAPH2O60879 1101 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 AP3B2Q13367 1082 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 NUDT18Q6ZVK8 323 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 COA1Q9GZY4 146 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 WNT8AQ9H1J5 351 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 CYP4F11Q9HBI6 524 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 AMACRQ9UHK6 382 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 SERPIND1P05546 499 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 TMEM62Q0P6H9 643 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 DRP2Q13474 957 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 SLFN12LQ6IEE8 588 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 PPM1NQ8N819 430 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 SPATA33Q96N06 139 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 ALG13Q9NP73 1137 aaKnown RBP12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 L3MBTL1Q9Y468 752 aa12.71□□□□□ -0.37
PCDHA9-201ENST00000378122 UBE4BO95155 1302 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 CFAP69A5D8W1 941 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 CHEK2O96017 543 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 TBCCQ15814 346 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 LONP2Q86WA8 852 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 SPATA4Q8NEY3 305 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 TRAF3IP3Q9Y228 551 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 FAM187AA6NFU0 413 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 DYNC1LI2O43237 492 aaPredicted RBP12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 ESRRBO95718 433 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 CHN1P15882 459 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 PADI6Q6TGC4 694 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 DGKHQ86XP1 1220 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 GIPC2Q8TF65 315 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 RUBCNQ92622 972 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 HPS3Q969F9 1004 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 ASNSD1Q9NWL6 643 aa12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 SUCLA2Q9P2R7 463 aaPredicted RBP12.71□□□□□ -0.38
PCDHA9-201ENST00000378122 SNAP23O00161 211 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 PYGBP11216 843 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 PAMP19021 973 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 ARL13BQ3SXY8 428 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 ANKMY2Q8IV38 441 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 CHP1Q99653 195 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 COG4Q9H9E3 785 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 ATP6V0A4Q9HBG4 840 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 CAPN10Q9HC96 672 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 IQGAP3Q86VI3 1631 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 PVALEFA0A1B0GWK0 134 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 PIK3R2O00459 728 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 MTMR1Q13613 665 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 NUDCD3Q8IVD9 361 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 SLC26A7Q8TE54 656 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 KLHL8Q9P2G9 620 aaPredicted RBP12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 PCSK1NQ9UHG2 260 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 ANKARQ7Z5J8 1434 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 IZUMO3Q5VZ72 239 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 SAMD7Q7Z3H4 446 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 THNSL1Q8IYQ7 743 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 DHX38Q92620 1227 aaKnown RBP12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 RFX7Q2KHR2 1363 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 PRRG1O14668 218 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 STOX1Q6ZVD7 989 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 SLC44A5Q8NCS7 719 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 SMARCAL1Q9NZC9 954 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 WARS2Q9UGM6 360 aaKnown RBP12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 PSMC5P62195 406 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 TTLL4Q14679 1199 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 ZNF699Q32M78 642 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 KDELC2Q7Z4H8 507 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 SPATA21Q7Z572 469 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 FAM160B2Q86V87 743 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 ARHGAP18Q8N392 663 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 ADA2Q9NZK5 511 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 IP6K2Q9UHH9 426 aa12.7□□□□□ -0.38
PCDHA9-201ENST00000378122 KPNA7A9QM74 516 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 KRT38O76015 456 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 LDHAP00338 332 aaKnown RBP12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 OCM2P0CE71 109 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 OCMP0CE72 109 aaPredicted RBP12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 GNA15P30679 374 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 EPHX2P34913 555 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 GMPSP49915 693 aaPredicted RBP12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 GPC3P51654 580 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 JAK3P52333 1124 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 CDHR1Q96JP9 859 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 KIFC3Q9BVG8 833 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 KLHL11Q9NVR0 708 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 BARHL2Q9NY43 387 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 TRIM33Q9UPN9 1127 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 ABCA8O94911 1581 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 CPDO75976 1380 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 SPTLC1O15269 473 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 ATP6V1E1P36543 226 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 ROR1Q01973 937 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms