RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 NR1I2O75469 434 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 ALDH2P05091 517 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 EDN1P05305 212 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 LTBRP36941 435 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 RBM10P98175 930 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 ADAM15Q13444 863 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 DUSP6Q16828 381 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 CTC1Q2NKJ3 1217 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 ATF7IP2Q5U623 682 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 GPBP1Q86WP2 473 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 SYT2Q8N9I0 419 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 BCL7CQ8WUZ0 217 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 CDCA3Q99618 268 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 TMEM175Q9BSA9 504 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 TIPINQ9BVW5 301 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 GDAQ9Y2T3 454 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 BRWD1Q9NSI6 2320 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 FSD2A1L4K1 749 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 NRP1O14786 923 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 CXCL14O95715 111 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 HARSP12081 509 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 PLCG1P19174 1290 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 GUCY2CP25092 1073 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 TXLNAP40222 546 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 SMTNP53814 917 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 SLC12A3P55017 1021 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 STRN3Q13033 797 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 COL19A1Q14993 1142 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 DCAF4L1Q3SXM0 396 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 EEF1DP3Q658K8 133 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 APBB1IPQ7Z5R6 666 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 DDX53Q86TM3 631 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 DAW1Q8N136 415 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 APOL5Q9BWW9 433 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 MRPL4Q9BYD3 311 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 ZBP1Q9H171 429 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 ZHX3Q9H4I2 956 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 ZSCAN16Q9H4T2 348 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 MIOSQ9NXC5 875 aa12.73□□□□□ -0.37
SMARCE1-203ENST00000377808 C2orf71A6NGG8 1288 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 C2CD2LO14523 706 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 MBTPS2O43462 519 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 SLC26A4O43511 780 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 RECQL4O94761 1208 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 GLP2RO95838 553 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 PLS3P13797 630 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 MATR3P43243 847 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 GRIK3Q13003 919 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 MAPK7Q13164 816 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 SMAD4Q13485 552 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 MCM6Q14566 821 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 STK38Q15208 465 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 PTPAQ15257 358 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 FOXD4L6Q3SYB3 417 aaPredicted RBP12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 ZNF568Q3ZCX4 644 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 NT5DC1Q5TFE4 455 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 FOXD4L3Q6VB84 417 aaPredicted RBP12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 ZBTB33Q86T24 672 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 COLGALT2Q8IYK4 626 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 KCTD17Q8N5Z5 321 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 MRPL43Q8N983 215 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 RABGGTAQ92696 567 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 RAD54LQ92698 747 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 BICD1Q96G01 975 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 CLIC6Q96NY7 704 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 TCHPQ9BT92 498 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 C17orf75Q9HAS0 396 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 KCND2Q9NZV8 630 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 CLEC1BQ9P126 229 aa12.72□□□□□ -0.37
SMARCE1-203ENST00000377808 CASTOR2A6NHX0 329 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 TBCAO75347 108 aaKnown RBP12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 FAM13AO94988 1023 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 URODP06132 367 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 CTSAP10619 480 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 OSTNP61366 133 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 MYCT1Q8N699 235 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 VN1R2Q8NFZ6 395 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 EPSTI1Q96J88 318 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 USP28Q96RU2 1077 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 TARS2Q9BW92 718 aaKnown RBP12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 COLEC11Q9BWP8 271 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 TMEM134Q9H6X4 195 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 MARCH5Q9NX47 278 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 ARHGAP28Q9P2N2 729 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 ANKFY1Q9P2R3 1169 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 CACNG4Q9UBN1 327 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 CCDC39Q9UFE4 941 aa12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 FBXO2Q9UK22 296 aaPredicted RBP12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 RBM19Q9Y4C8 960 aaKnown RBP12.71□□□□□ -0.37
SMARCE1-203ENST00000377808 TDRD15B5MCY1 1934 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 F8W810 466 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 K7ENM7 598 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 CLASP2O75122 1294 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 YARSP54577 528 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 GIT2Q14161 759 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 ARSHQ5FYA8 562 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 GLRA4Q5JXX5 417 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 KIAA1841Q6NSI8 718 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 USP49Q70CQ1 688 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms