RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CCDC121Q6ZUS5 278 aa15.52■□□□□ 0.08
TCOF1-202ENST00000377797 RSRC2Q7L4I2 434 aaKnown RBP15.52■□□□□ 0.08
TCOF1-202ENST00000377797 ASCC2Q9H1I8 757 aaPredicted RBP15.52■□□□□ 0.08
TCOF1-202ENST00000377797 GOLGA8KD6RF30 607 aa15.52■□□□□ 0.07
TCOF1-202ENST00000377797 PON1P27169 355 aa15.52■□□□□ 0.07
TCOF1-202ENST00000377797 ANXA13P27216 316 aa15.52■□□□□ 0.07
TCOF1-202ENST00000377797 TRIP13Q15645 432 aaPredicted RBP15.52■□□□□ 0.07
TCOF1-202ENST00000377797 NAB2Q15742 525 aa15.52■□□□□ 0.07
TCOF1-202ENST00000377797 KCTD6Q8NC69 237 aa15.52■□□□□ 0.07
TCOF1-202ENST00000377797 PI4K2AQ9BTU6 479 aa15.52■□□□□ 0.07
TCOF1-202ENST00000377797 HEMGNQ9BXL5 484 aa15.52■□□□□ 0.07
TCOF1-202ENST00000377797 DDX47Q9H0S4 455 aaKnown RBP15.52■□□□□ 0.07
TCOF1-202ENST00000377797 P4HA2O15460 535 aa15.52■□□□□ 0.07
TCOF1-202ENST00000377797 SLC30A5Q8TAD4 765 aa15.52■□□□□ 0.07
TCOF1-202ENST00000377797 MMTAG2Q9BU76 263 aaKnown RBP15.52■□□□□ 0.07
TCOF1-202ENST00000377797 INPP5FQ9Y2H2 1132 aa15.52■□□□□ 0.07
TCOF1-202ENST00000377797 ZNF185O15231 689 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 KLRC4O43908 158 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 HUS1O60921 280 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 SOX10P56693 466 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 APBA1Q02410 837 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 TRIM72Q6ZMU5 477 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 SPATA4Q8NEY3 305 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 SYN2Q92777 582 aaPredicted RBP15.51■□□□□ 0.07
TCOF1-202ENST00000377797 CDCA5Q96FF9 252 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 WDR18Q9BV38 432 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 ZWILCHQ9H900 591 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 DBR1Q9UK59 544 aaKnown RBP15.51■□□□□ 0.07
TCOF1-202ENST00000377797 EXTL3O43909 919 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 KLRC1P26715 233 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 GCLCP48506 637 aaPredicted RBP15.51■□□□□ 0.07
TCOF1-202ENST00000377797 PPATQ06203 517 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 ATF7IP2Q5U623 682 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 PDZD4Q76G19 769 aaPredicted RBP15.51■□□□□ 0.07
TCOF1-202ENST00000377797 SIX6OS1Q8N1H7 587 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 GLIS3Q8NEA6 775 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 DIS3Q9Y2L1 958 aaKnown RBP15.51■□□□□ 0.07
TCOF1-202ENST00000377797 SPEF2Q9C093 1822 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 A0A087X0T9 212 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 RTN2O75298 545 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 PSMD10O75832 226 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 FAM228BP0C875 321 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 SLC12A3P55017 1021 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 GLE1Q53GS7 698 aaKnown RBP15.51■□□□□ 0.07
TCOF1-202ENST00000377797 HOMER3Q9NSC5 361 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 ITIH3Q06033 890 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 PRPF31Q8WWY3 499 aaKnown RBP15.51■□□□□ 0.07
TCOF1-202ENST00000377797 PIN4Q9Y237 131 aaKnown RBP15.51■□□□□ 0.07
TCOF1-202ENST00000377797 NID2Q14112 1375 aa15.51■□□□□ 0.07
TCOF1-202ENST00000377797 IRF6O14896 467 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 SCP2P22307 547 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 SEZ6Q53EL9 994 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 FMO2Q99518 471 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 ZFYVE28Q9HCC9 887 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 PRMT7Q9NVM4 692 aaPredicted RBP15.5■□□□□ 0.07
TCOF1-202ENST00000377797 AGAP1Q9UPQ3 857 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 METTL7BQ6UX53 244 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 CATSPERGQ6ZRH7 1159 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 VSIG10LQ86VR7 867 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 ZNF507Q8TCN5 953 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 PURBQ96QR8 312 aaKnown RBP15.5■□□□□ 0.07
TCOF1-202ENST00000377797 LRFN2Q9ULH4 789 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 STRIP2Q9ULQ0 834 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 TRAF3IP3Q9Y228 551 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 SARNPP82979 210 aaKnown RBP15.5■□□□□ 0.07
TCOF1-202ENST00000377797 LGSNQ5TDP6 509 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 CC2D1AQ6P1N0 951 aaPredicted RBP15.5■□□□□ 0.07
TCOF1-202ENST00000377797 EMBQ6PCB8 327 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 ANKRD42Q8N9B4 389 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 SEPT10Q9P0V9 454 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 DOT1LQ8TEK3 1739 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 IGKV6D-41A0A0C4DH26 115 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 ESYT3A0FGR9 886 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 M0QYV0 167 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 MCF2LO15068 1137 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 CLCN3P51790 818 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 PSMC1P62191 440 aaKnown RBP15.5■□□□□ 0.07
TCOF1-202ENST00000377797 SLC35G2Q8TBE7 412 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 MGARPQ8TDB4 240 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 NSMCE1Q8WV22 266 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 P3H4Q92791 437 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.5■□□□□ 0.077e-7■□□□□ 9.5
TCOF1-202ENST00000377797 ANAPC5Q9UJX4 755 aa15.5■□□□□ 0.07
TCOF1-202ENST00000377797 TGFB3P10600 412 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 NOP14P78316 857 aaKnown RBP15.49■□□□□ 0.07
TCOF1-202ENST00000377797 SF3A3Q12874 501 aaKnown RBP eCLIP15.49■□□□□ 0.07
TCOF1-202ENST00000377797 NPY5RQ15761 445 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 IL31RAQ8NI17 732 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 WHAMMQ8TF30 809 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 RNF25Q96BH1 459 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-202ENST00000377797 SNX24Q9Y343 169 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 LRRC10BA6NIK2 292 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 GAS2O43903 313 aaKnown RBP15.49■□□□□ 0.07
TCOF1-202ENST00000377797 ITGB5P18084 799 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 GNGT1P63211 74 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 DGKDQ16760 1214 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 CYP2C9P11712 490 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 NAMPTP43490 491 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 ALDH5A1P51649 535 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-202ENST00000377797 NLRP11P59045 1033 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms